RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 RFX3P48380 749 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 FOXD4Q12950 439 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 PON3Q15166 354 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 DUSP5Q16690 384 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 XKR7Q5GH72 579 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 ARL13AQ5H913 290 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 MISPQ8IVT2 679 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 GTPBP8Q8N3Z3 284 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 CNEP1R1Q8N9A8 125 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 OR5M1Q8NGP8 315 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 PSMA8Q8TAA3 256 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 FNDC9Q8TBE3 224 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 TWIST2Q8WVJ9 160 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 ZNF845Q96IR2 970 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 PPP3R2Q96LZ3 170 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 WFIKKN1Q96NZ8 548 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 SLC39A3Q9BRY0 314 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 EML4Q9HC35 981 aaKnown RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 UBQLN4Q9NRR5 601 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 SIRT3Q9NTG7 399 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 BEX4Q9NWD9 120 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 PAQR5Q9NXK6 330 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 TMEM114B3SHH9 223 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 SEC14L5O43304 696 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 NDUFB5O43674 189 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 SMNDC1O75940 238 aaKnown RBP eCLIP15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 IL11P20809 199 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 HOXC12P31275 282 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 UGT2B10P36537 528 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 CPOXP36551 454 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 SERPINB5P36952 375 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 RPL3P39023 403 aaKnown RBP15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 SERPINB4P48594 390 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 PRKAG1P54619 331 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 FAM214BQ7L5A3 538 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 CLHC1Q8NHS4 586 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 SLC9A6Q92581 669 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 ZBTB8AQ96BR9 441 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 FAM120BQ96EK7 910 aaKnown RBP15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 ADGRG7Q96K78 797 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 FAM111AQ96PZ2 611 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 STACQ99469 402 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 OPN3Q9H1Y3 402 aaPredicted RBP15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 ANKZF1Q9H8Y5 726 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 DUSP22Q9NRW4 184 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 EIF3LQ9Y262 564 aaKnown RBP15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 FIS1Q9Y3D6 152 aa15.47■□□□□ 0.07
VPS9D1-203ENST00000563798 DEFB108AA8MXU0 73 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 TMEM233B4DJY2 109 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 PIP5K1BO14986 540 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 SCAMP2O15127 329 aaKnown RBP15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 ADAMDEC1O15204 470 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 SIAH2O43255 324 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 AQP8O94778 261 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 SOX30O94993 753 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 ALOX5P09917 674 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 CRYGSP22914 178 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 MAPK1P28482 360 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 CCKARP32238 428 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 PRIM2P49643 509 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 CTU2Q2VPK5 515 aaKnown RBP15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 GALNTL6Q49A17 601 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 CPTPQ5TA50 214 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 ZAR1Q86SH2 424 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 WDR75Q8IWA0 830 aaKnown RBP15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 NATD1Q8N6N6 113 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 OR2W6PQ8NHA6 318 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 TRIM44Q96DX7 344 aaPredicted RBP15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 C16orf58Q96GQ5 468 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 MARK4Q96L34 752 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 BTBD2Q9BX70 525 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 ROPN1BQ9BZX4 212 aaPredicted RBP15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 ROPN1Q9HAT0 212 aaPredicted RBP15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 PLSCR4Q9NRQ2 329 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 ZNF226Q9NYT6 803 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 SLC17A7Q9P2U7 560 aa15.46■□□□□ 0.07
VPS9D1-203ENST00000563798 ACANP16112 2415 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 A0A1W2PRB8 838 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 TLDC2A0PJX2 215 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 C16orf97H3BN30 126 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 LYPLA1O75608 230 aaPredicted RBP15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 POU2F1P14859 743 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 HPCAL1P37235 193 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 RAC1P63000 192 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 SIRPAP78324 504 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 POU4F3Q15319 338 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 PLPPR5Q32ZL2 321 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 FIGNL1Q6PIW4 674 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 CXorf67Q86X51 503 aaPredicted RBP15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 DDIASQ8IXT1 998 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 COX18Q8N8Q8 333 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 ZNF610Q8N9Z0 462 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 CAVIN3Q969G5 261 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 COQ8BQ96D53 544 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 POM121Q96HA1 1249 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 GMPPAQ96IJ6 420 aaPredicted RBP15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 PIP5K1AQ99755 562 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 PIGUQ9H490 435 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 NEUROD4Q9HD90 331 aa15.45■□□□□ 0.06
VPS9D1-203ENST00000563798 MED17Q9NVC6 651 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms