RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 NPIPB9F8W1W9 429 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 AP3D1O14617 1153 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 HS6ST1O60243 411 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 ZFAND5O76080 213 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 CD82P27701 267 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 ALDH3A2P51648 485 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 SSPNQ14714 243 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 COLEC12Q5KU26 742 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 RANBP3LQ86VV4 465 aaPredicted RBP20.22■□□□□ 0.83
LINC01960-201ENST00000563759 OR4C3Q8NH37 302 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 NRBF2Q96F24 287 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 ZNF597Q96LX8 424 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 PRRC1Q96M27 445 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 RBM4BQ9BQ04 359 aaKnown RBP20.22■□□□□ 0.83
LINC01960-201ENST00000563759 RBM4Q9BWF3 364 aaKnown RBP20.22■□□□□ 0.83
LINC01960-201ENST00000563759 DEFB126Q9BYW3 111 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 HOXD1Q9GZZ0 328 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 UBQLN4Q9NRR5 601 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.22■□□□□ 0.83
LINC01960-201ENST00000563759 KIF17Q9P2E2 1029 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 SCDO00767 359 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 UTS2O95399 124 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 PRKACGP22612 351 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 TAS2R41P59536 307 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 PIN1Q13526 163 aaPredicted RBP20.22■□□□□ 0.83
LINC01960-201ENST00000563759 FGFBP1Q14512 234 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 FGD3Q5JSP0 725 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 NDUFAF7Q7L592 441 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 PPP1R32Q7Z5V6 425 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 IL22RA1Q8N6P7 574 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 FNDC11Q9BVV2 318 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 NMNAT1Q9HAN9 279 aaPredicted RBP20.22■□□□□ 0.83
LINC01960-201ENST00000563759 CTPS2Q9NRF8 586 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 ACAD8Q9UKU7 415 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 A4GNTQ9UNA3 340 aa20.22■□□□□ 0.83
LINC01960-201ENST00000563759 WWP2O00308 870 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 ABCB7O75027 752 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 HPRP00739 348 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 ALPLP05186 524 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 H1F0P07305 194 aaKnown RBP20.21■□□□□ 0.83
LINC01960-201ENST00000563759 HOXC5Q00444 222 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 EXOC3L2Q2M3D2 409 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 PLAG1Q6DJT9 500 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 C16orf47Q6ZP98 133 aaPredicted RBP20.21■□□□□ 0.83
LINC01960-201ENST00000563759 TMPRSS7Q7RTY8 843 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 ELP5Q8TE02 316 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 IMMP1LQ96LU5 166 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 BARD1Q99728 777 aaKnown RBP20.21■□□□□ 0.83
LINC01960-201ENST00000563759 SMURF2Q9HAU4 748 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 ZNF160Q9HCG1 818 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 ACER3Q9NUN7 267 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 DLL3Q9NYJ7 618 aa20.21■□□□□ 0.83
LINC01960-201ENST00000563759 C7orf72A4D263 438 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 CPSF4LA6NMK7 179 aaKnown RBP20.2■□□□□ 0.82
LINC01960-201ENST00000563759 ACADSP16219 412 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 LCN1P31025 176 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 IFNA8P32881 189 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 SMIM11AP58511 58 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 PLEKHM3Q6ZWE6 761 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 OIT3Q8WWZ8 545 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 NR4A3Q92570 626 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 MCHR1Q99705 422 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 GABARAPL1Q9H0R8 117 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 SMPD3Q9NY59 655 aaPredicted RBP20.2■□□□□ 0.82
LINC01960-201ENST00000563759 FLRT3Q9NZU0 649 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 LOC101059948A0A1B0GTJ6 334 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 A0A1W2PQ72 361 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 SERINC4A6NH21 518 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 CDRT15L2A8MXV6 281 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 TSPAN2O60636 221 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 ICOSLGO75144 302 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 BCAS1O75363 584 aaPredicted RBP20.2■□□□□ 0.82
LINC01960-201ENST00000563759 OXSR1O95747 527 aaPredicted RBP20.2■□□□□ 0.82
LINC01960-201ENST00000563759 CSTAP01040 98 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 GKN3PP0CG01 181 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 CYP4B1P13584 511 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 F8A1P23610 371 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 PNLIPRP2P54317 469 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 PPP2R2BQ00005 443 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 GK3PQ14409 553 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 ZSWIM7Q19AV6 140 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 CMIPQ8IY22 773 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 OR4C15Q8NGM1 316 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 M1APQ8TC57 530 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 ALPK1Q96QP1 1244 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 PRR14Q9BWN1 585 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 OSBPL10Q9BXB5 764 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 FAM117AQ9C073 453 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 EVA1AQ9H8M9 152 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 NPFFR2Q9Y5X5 522 aa20.2■□□□□ 0.82
LINC01960-201ENST00000563759 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.19■□□□□ 0.82
LINC01960-201ENST00000563759 TERTO14746 1132 aaKnown RBP20.19■□□□□ 0.82
LINC01960-201ENST00000563759 TPST2O60704 377 aa20.19■□□□□ 0.82
LINC01960-201ENST00000563759 UBTFL6P0CB48 400 aaPredicted RBP20.19■□□□□ 0.82
LINC01960-201ENST00000563759 KLHL26Q53HC5 615 aa20.19■□□□□ 0.82
LINC01960-201ENST00000563759 ENTPD8Q5MY95 495 aa20.19■□□□□ 0.82
LINC01960-201ENST00000563759 TSPYL5Q86VY4 417 aaPredicted RBP20.19■□□□□ 0.82
LINC01960-201ENST00000563759 GRAMD2AQ8IUY3 354 aa20.19■□□□□ 0.82
LINC01960-201ENST00000563759 OFCC1Q8IZS5 231 aa20.19■□□□□ 0.82
LINC01960-201ENST00000563759 ATG16L2Q8NAA4 619 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms