RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 NDUFA7O95182 113 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 GJB5O95377 273 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 PIGRP01833 764 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 GP9P14770 177 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 NQO2P16083 231 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 TNNI1P19237 187 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 CD52P31358 61 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 GTF2H1P32780 548 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 MMP12P39900 470 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 CCNG1P51959 295 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 ATP12AP54707 1039 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 ATP5J2P56134 94 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 TAS2R38P59533 333 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 NAAAQ02083 359 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 BST2Q10589 180 aaKnown RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 GK3PQ14409 553 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 HEPACAMQ14CZ8 416 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 BCL2A1Q16548 175 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 ALG10Q5BKT4 473 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 ALG10BQ5I7T1 473 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 MARCH8Q5T0T0 291 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 LYPLAL1Q5VWZ2 237 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 FRG2Q64ET8 278 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 CLEC6AQ6EIG7 209 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 NADSYN1Q6IA69 706 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 SHC4Q6S5L8 630 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 CYP4V2Q6ZWL3 525 aaPredicted RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 MON1BQ7L1V2 547 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 WDR53Q7Z5U6 358 aaPredicted RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 RNF130Q86XS8 419 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 GPD1LQ8N335 351 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 FGFRL1Q8N441 504 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 SYT14Q8NB59 555 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 ADAD2Q8NCV1 583 aaKnown RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 ZNF548Q8NEK5 533 aaPredicted RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 DDHD1Q8NEL9 900 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 OR13J1Q8NGT2 312 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 TMEM174Q8WUU8 243 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 ASB5Q8WWX0 329 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 FAM3CQ92520 227 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 PHF21AQ96BD5 680 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 PELI1Q96FA3 418 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 LCORQ96JN0 433 aaPredicted RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 AMDHD1Q96NU7 426 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 SPRY4Q9C004 299 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 DCLK3Q9C098 648 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 GKN1Q9NS71 199 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 SERTAD4Q9NUC0 356 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 NLGN3Q9NZ94 848 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 TINAGQ9UJW2 476 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 FBXL2Q9UKC9 423 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 MRTO4Q9UKD2 239 aaKnown RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 PILRAQ9UKJ1 303 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 GSTK1Q9Y2Q3 226 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 KLHDC2Q9Y2U9 406 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 PCDHGB1Q9Y5G3 927 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 NPTNQ9Y639 398 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 SPIN1Q9Y657 262 aaPredicted RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 MYH7BA7E2Y1 1941 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 SH3PXD2BA1X283 911 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 MTMR11A4FU01 709 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 UNC119BA6NIH7 251 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 A8MU76 341 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 PDZK1P1A8MUH7 402 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 H0YL77 283 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 SGK494L7N484 410 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 SLC16A4O15374 487 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 BUD23O43709 281 aaKnown RBP4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 GRAP2O75791 330 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 WISP2O76076 250 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 OR2F2O95006 317 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 RAF1P04049 648 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 ACP2P11117 423 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 FGF5P12034 268 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 ACKR3P25106 362 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 TNFSF8P32971 234 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 SPAM1P38567 509 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 MAGEA9P43362 315 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 NDUFA8P51970 172 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 IRX1P78414 480 aaPredicted RBP4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 PLP2Q04941 152 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 PEX6Q13608 980 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 PON2Q15165 354 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 CDSNQ15517 529 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 EFNB3Q15768 340 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 FAM69BQ5VUD6 431 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 RHBDD2Q6NTF9 364 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 PPP1R2P3Q6NXS1 205 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 SCYL2Q6P3W7 929 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 C19orf35Q6ZS72 473 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 C5orf24Q7Z6I8 188 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 GPSM1Q86YR5 675 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 LRRC34Q8IZ02 419 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 ELMOD1Q8N336 334 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 SLC25A41Q8N5S1 370 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 C1orf52Q8N6N3 182 aaKnown RBP4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 TMEM161BQ8NDZ6 487 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 OR10H4Q8NGA5 316 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 OR51L1Q8NGJ5 315 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms