RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 IL12BP29460 328 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 CHRNB4P30926 498 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 CDKN2CP42773 168 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 MAN2A2P49641 1150 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 KCNJ2P63252 427 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 STX5Q13190 355 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 SNTA1Q13424 505 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 SLC10A1Q14973 349 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 DUSP5Q16690 384 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 HYAL4Q2M3T9 481 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 TMEM211Q6ICI0 200 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 SLC2A7Q6PXP3 512 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 MTERF4Q7Z6M4 381 aaKnown RBP14.29□□□□□ -0.12
USB1-208ENST00000563207 MTDHQ86UE4 582 aaKnown RBP14.29□□□□□ -0.12
USB1-208ENST00000563207 COX18Q8N8Q8 333 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 OR10Q1Q8NGQ4 319 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 ZFP90Q8TF47 636 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 JADE3Q92613 823 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 JSRP1Q96MG2 331 aaPredicted RBP14.29□□□□□ -0.12
USB1-208ENST00000563207 G6PC3Q9BUM1 346 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 PAIP1Q9H074 479 aaKnown RBP14.29□□□□□ -0.12
USB1-208ENST00000563207 SLC6A15Q9H2J7 730 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 EXD2Q9NVH0 621 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 THUMPD1Q9NXG2 353 aaKnown RBP14.29□□□□□ -0.12
USB1-208ENST00000563207 ALKBH4Q9NXW9 302 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 Q9UFV3 132 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 CNOT11Q9UKZ1 510 aaKnown RBP14.29□□□□□ -0.12
USB1-208ENST00000563207 PCDHB14Q9Y5E9 798 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 DCTN3O75935 186 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 IL33O95760 270 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 GSNP06396 782 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 SSTR2P30874 369 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 KHKP50053 298 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 FBXW4P57775 412 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 POU6F2P78424 691 aaPredicted RBP14.28□□□□□ -0.12
USB1-208ENST00000563207 CYLC2Q14093 348 aaPredicted RBP14.28□□□□□ -0.12
USB1-208ENST00000563207 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.28□□□□□ -0.12
USB1-208ENST00000563207 PAGE3Q5JUK9 113 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 ARHGAP21Q5T5U3 1957 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 ATAD3BQ5T9A4 648 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 PRR22Q8IZ63 422 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 FBXW8Q8N3Y1 598 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 OR4N2Q8NGD1 307 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 RP9Q8TA86 221 aaKnown RBP14.28□□□□□ -0.12
USB1-208ENST00000563207 FAM110BQ8TC76 370 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 SPPL2AQ8TCT8 520 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 C14orf79Q96F83 325 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 OR7D2Q96RA2 312 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 YIPF4Q9BSR8 244 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 CCDC106Q9BWC9 280 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 MYLK2Q9H1R3 596 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 LDAHQ9H6V9 325 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 ZNF703Q9H7S9 590 aaPredicted RBP14.28□□□□□ -0.12
USB1-208ENST00000563207 TPT1P8Q9HAU6 139 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 HHATLQ9HCP6 504 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 ACAD8Q9UKU7 415 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 CORO2BQ9UQ03 480 aa14.28□□□□□ -0.12
USB1-208ENST00000563207 INTS1Q8N201 2190 aaKnown RBP14.27□□□□□ -0.12
USB1-208ENST00000563207 TRGV5A0A0B4J1U4 118 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 AQP7O14520 342 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 UGT2B11O75310 529 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 KCNK2O95069 426 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 SNX4O95219 450 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 GUSBP08236 651 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 HOXB9P17482 250 aaPredicted RBP14.27□□□□□ -0.13
USB1-208ENST00000563207 MSX1P28360 303 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 DLX5P56178 289 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 FADDQ13158 208 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 MMEL1Q495T6 779 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 AP1ARQ63HQ0 302 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 ANGPTL8Q6UXH0 198 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 SEM1Q6ZVN7 128 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 WDR53Q7Z5U6 358 aaPredicted RBP14.27□□□□□ -0.13
USB1-208ENST00000563207 EID3Q8N140 333 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 CLEC4FQ8N1N0 589 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 PCYOX1LQ8NBM8 494 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 CHDHQ8NE62 594 aaPredicted RBP14.27□□□□□ -0.13
USB1-208ENST00000563207 ASB5Q8WWX0 329 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 PIK3R3Q92569 461 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 NRGNQ92686 78 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 HGDQ93099 445 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 RMND5BQ96G75 393 aaPredicted RBP14.27□□□□□ -0.13
USB1-208ENST00000563207 LRRC37BQ96QE4 947 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 ADOQ96SZ5 270 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 EXO5Q9H790 373 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 MCCC2Q9HCC0 563 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 ZFP64Q9NPA5 681 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 KCNJ16Q9NPI9 418 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 ABCG2Q9UNQ0 655 aa14.27□□□□□ -0.13
USB1-208ENST00000563207 GXYLT2A0PJZ3 443 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 OR14I1A6ND48 311 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 CLIC1O00299 241 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 BCKDKO14874 412 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 SUSD5O60279 629 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 ARHGAP11BQ3KRB8 267 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 FNDC7Q5VTL7 733 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 HEPHL1Q6MZM0 1159 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 SLC30A6Q6NXT4 461 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 DLEU7Q6UYE1 221 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 DNAJC14Q6Y2X3 702 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms