RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 DUXAA6NLW8 204 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 CCT8L1PA6NM43 557 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 BBIP1A8MTZ0 92 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 ALG1L2C9J202 215 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 NPIPA5E9PKD4 350 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 NME4O00746 187 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 NDUFAB1O14561 156 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 SLC28A2O43868 658 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 GMFGO60234 142 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 ADAM11O75078 769 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 STX11O75558 287 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 GCM2O75603 506 aaPredicted RBP8.92□□□□□ -0.98
CLK3-208ENST00000562626 ANGPTL1O95841 491 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 T-ENOLP0DO92 83 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 ENDOUP21128 410 aaKnown RBP8.92□□□□□ -0.98
CLK3-208ENST00000562626 RPS4Y1P22090 263 aaKnown RBP8.92□□□□□ -0.98
CLK3-208ENST00000562626 TCEA1P23193 301 aaKnown RBP8.92□□□□□ -0.98
CLK3-208ENST00000562626 UQCRFS1P47985 274 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 PPIAP62937 165 aaKnown RBP8.92□□□□□ -0.98
CLK3-208ENST00000562626 FADDQ13158 208 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 MAPRE2Q15555 327 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 INAQ16352 499 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 HYAL4Q2M3T9 481 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 MMEL1Q495T6 779 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 FLYWCH1Q4VC44 716 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 GPAT3Q53EU6 434 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 KLHL26Q53HC5 615 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 PDZK1Q5T2W1 519 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 AP1ARQ63HQ0 302 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 TIGD3Q6B0B8 471 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 SLC30A6Q6NXT4 461 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 CBLN3Q6UW01 205 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 FAM180AQ6UWF9 173 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 CALHM3Q86XJ0 350 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 SPPL2CQ8IUH8 684 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 ZZZ3Q8IYH5 903 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 OR2M3Q8NG83 312 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 NFKBIDQ8NI38 313 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 NR4A3Q92570 626 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 MIB2Q96AX9 1013 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 TMCO6Q96DC7 493 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 ZNF597Q96LX8 424 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 LRRC37BQ96QE4 947 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 DEFB127Q9H1M4 99 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 DSN1Q9H410 356 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 KAT8Q9H7Z6 458 aaKnown RBP8.92□□□□□ -0.98
CLK3-208ENST00000562626 ZFP64Q9NPA5 681 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 EXD2Q9NVH0 621 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 MED11Q9P086 117 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 TNFRSF10DQ9UBN6 386 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 PACSIN3Q9UKS6 424 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 NPIPA1Q9UND3 350 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 ABCG2Q9UNQ0 655 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 WDR45Q9Y484 360 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 POLEQ07864 2286 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 RELNP78509 3460 aa8.92□□□□□ -0.98
CLK3-208ENST00000562626 INTS1Q8N201 2190 aaKnown RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 SHISA8B8ZZ34 492 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 DCTN3O75935 186 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 PDE9AO76083 593 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 EPPINO95925 133 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 NGFRP08138 427 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 NR2F1P10589 423 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 ZNF24P17028 368 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 PRDX6P30041 224 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 NUDT2P50583 147 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 CRYBA2P53672 197 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 ATP12AP54707 1039 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 PSPHP78330 225 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 ALDH6A1Q02252 535 aaKnown RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 PLGLB1Q02325 96 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 ZNF117Q03924 483 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 MRPL49Q13405 166 aaKnown RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 ZNF141Q15928 474 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 EIPR1Q53HC9 387 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 GCNT6Q5T4J0 391 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 LRRC74BQ6ZQY2 392 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 NET1Q7Z628 596 aaPredicted RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 VRK2Q86Y07 508 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 SLC15A3Q8IY34 581 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 ZNF619Q8N2I2 560 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 FADS6Q8N9I5 356 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 OR10A6Q8NH74 314 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 DUSP19Q8WTR2 217 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 SH3YL1Q96HL8 342 aaPredicted RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 ZNF583Q96ND8 569 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 TRNT1Q96Q11 434 aaKnown RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 TREX2Q9BQ50 279 aaPredicted RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 G6PC3Q9BUM1 346 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 THUMPD3Q9BV44 507 aaKnown RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 SLC6A15Q9H2J7 730 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 ZDHHC11Q9H8X9 412 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 A4GALTQ9NPC4 353 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 UBQLN4Q9NRR5 601 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 OLAHQ9NV23 265 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 PPP4R1LQ9P1A2 415 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 SPRR3Q9UBC9 169 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 MRTO4Q9UKD2 239 aaKnown RBP8.91□□□□□ -0.98
CLK3-208ENST00000562626 C15orf41Q9Y2V0 281 aa8.91□□□□□ -0.98
CLK3-208ENST00000562626 L3MBTL1Q9Y468 752 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms