RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 SLC35F1Q5T1Q4 408 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 PDZK1Q5T2W1 519 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 MRM1Q6IN84 353 aaKnown RBP10.26□□□□□ -0.77
NEIL1-202ENST00000561643 PLET1Q6UQ28 207 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 ARSKQ6UWY0 536 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 KIAA1324Q6UXG2 1013 aaKnown RBP10.26□□□□□ -0.77
NEIL1-202ENST00000561643 ZNF600Q6ZNG1 722 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 ADGRD2Q7Z7M1 963 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 GJD3Q8N144 294 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 ZFP41Q8N8Y5 198 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 SYT14Q8NB59 555 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 PIGXQ8TBF5 258 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 RIT1Q92963 219 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 TIMM29Q9BSF4 260 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 TRAF4Q9BUZ4 470 aaPredicted RBP10.26□□□□□ -0.77
NEIL1-202ENST00000561643 SLC38A1Q9H2H9 487 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 TRIM45Q9H8W5 580 aaPredicted RBP10.26□□□□□ -0.77
NEIL1-202ENST00000561643 SEMA4GQ9NTN9 838 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 ING3Q9NXR8 418 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 KLHL28Q9NXS3 571 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 SPHK1Q9NYA1 384 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 DOCK9Q9BZ29 2069 aa10.26□□□□□ -0.77
NEIL1-202ENST00000561643 TMEM129A0AVI4 362 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 SYT5O00445 386 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 MYOGP15173 224 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 AHRP35869 848 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 RGS8P57771 180 aaPredicted RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 COL9A2Q14055 689 aaPredicted RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 TCEA2Q15560 299 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 MINDY4Q4G0A6 757 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 TMEM240Q5SV17 173 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 DDI2Q5TDH0 399 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 XKRXQ6PP77 449 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 COMMD7Q86VX2 200 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 CLDN22Q8N7P3 220 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 SRFBP1Q8NEF9 429 aaKnown RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 MARVELD3Q96A59 401 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 FGF20Q9NP95 211 aaPredicted RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 ZFR2Q9UPR6 939 aaKnown RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 GSTK1Q9Y2Q3 226 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 EXOSC1Q9Y3B2 195 aaKnown RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 SLC35F4A4IF30 521 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 ISM1B1AKI9 464 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 PLA2G10O15496 165 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 ASGR2P07307 311 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 GNSP15586 552 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 GAS1P54826 345 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 CDH11P55287 796 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 ABATP80404 500 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 RUNX3Q13761 415 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 COL19A1Q14993 1142 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 LTB4RQ15722 352 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 PRAMEF8Q5VWM4 474 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 PRAMEF7Q5VXH5 474 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 TANGO2Q6ICL3 276 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 SLC30A6Q6NXT4 461 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 RASSF6Q6ZTQ3 369 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 LHFPL3Q86UP9 236 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 SAMD14Q8IZD0 417 aaPredicted RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 FGF11Q92914 225 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 COL26A1Q96A83 441 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 ELP4Q96EB1 424 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 TEX12Q9BXU0 123 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 BTBD1Q9H0C5 482 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 CALML5Q9NZT1 146 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 PLEKHB1Q9UF11 243 aaPredicted RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 STK25O00506 426 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 CEACAM5P06731 702 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 POU2F2P09086 479 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 HLA-DMAP28067 261 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 CMPK1P30085 196 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 BTN3A2P78410 334 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 PYDC2Q56P42 97 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 GARNL3Q5VVW2 1013 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 MTSS1LQ765P7 747 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 ADAMTS15Q8TE58 950 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 ASB12Q8WXK4 309 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 AKAP1Q92667 903 aaKnown RBP eCLIP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 DIO2Q92813 273 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 CHFRQ96EP1 664 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 ARHGDIGQ99819 225 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 MIXL1Q9H2W2 232 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 GALNT9Q9HCQ5 603 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 APOBEC3BQ9UH17 382 aaKnown RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 CES1P1Q9UKY3 287 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 CLCA2Q9UQC9 943 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 LIPT1Q9Y234 373 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 NTNG1Q9Y2I2 539 aa10.25□□□□□ -0.77
NEIL1-202ENST00000561643 TP53BP1Q12888 1972 aaPredicted RBP10.25□□□□□ -0.77
NEIL1-202ENST00000561643 LINC00862A6NCI5 91 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 TRHRP34981 398 aaPredicted RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 ATP6V1E1P36543 226 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 GPR4P46093 362 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 STXBP1P61764 594 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 RGS1Q08116 209 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 MRPL28Q13084 256 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 BTN1A1Q13410 526 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 TPBGQ13641 420 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 GPR68Q15743 365 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 C9orf62Q8N4C0 152 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms