RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 KCNK6Q9Y257 313 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 DTX4Q9Y2E6 619 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 STK38LQ9Y2H1 464 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CRYL1Q9Y2S2 319 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 MRPS2Q9Y399 296 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 PKP3Q9Y446 797 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SNX10Q9Y5X0 201 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 PSAT1Q9Y617 370 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CCDC162PA2VCL2 907 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 TUBAL3A6NHL2 446 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 H7C0S8 307 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 RHODO00212 210 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 GPRIN2O60269 458 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CNOT3O75175 753 aaKnown RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZMPSTE24O75844 475 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 PIAS1O75925 651 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 VENTXO95231 258 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ANP32DO95626 131 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 STAMBPO95630 424 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 GSRP00390 522 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 UMODP07911 640 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 MMP2P08253 660 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CCDC166P0CW27 439 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 FCGR2AP12318 317 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZNF7P17097 686 aaPredicted RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 SRD5A1P18405 259 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 NCF2P19878 526 aaPredicted RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 CYP2A7P20853 494 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 SAT1P21673 171 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 HMGCLP35914 325 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 SLC1A2P43004 574 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZFP36L2P47974 494 aaKnown RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 RGS4P49798 205 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ATP4BP51164 291 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 STC1P52823 247 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 MVDP53602 400 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 NAGLUP54802 743 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 TAS2R39P59534 338 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 STX1BP61266 288 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 SNRPD1P62314 119 aaKnown RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 HERVK_113P63132 956 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 KCNJ2P63252 427 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ARF5P84085 180 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 XIAPP98170 497 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ID2Q02363 134 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CACNG1Q06432 222 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ELP6Q0PNE2 266 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ABRQ12979 859 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CYLC2Q14093 348 aaPredicted RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 IL13RA2Q14627 380 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 PCLAFQ15004 111 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 TYSND1Q2T9J0 566 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 PYCR3Q53H96 274 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CMPK2Q5EBM0 449 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZNF766Q5HY98 468 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CDKL4Q5MAI5 379 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ARMC12Q5T9G4 340 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 WLSQ5T9L3 541 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZNF626Q68DY1 528 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 LRRC8EQ6NSJ5 796 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZFP1Q6P2D0 407 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 TMEM26Q6ZUK4 368 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 SPATA19Q7Z5L4 167 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 DENND6AQ8IWF6 608 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CHERPQ8IWX8 916 aaKnown RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.94□□□□□ -1.94
SPG11-225ENST00000561391 FAM9CQ8IZT9 166 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 GHDCQ8N2G8 530 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 PAQR4Q8N4S7 273 aaPredicted RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 LRRC17Q8N6Y2 441 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CCNYL1Q8N7R7 359 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 GPATCH11Q8N954 259 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 DCAF4L2Q8NA75 395 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 OR2Y1Q8NGV0 311 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 OR1L3Q8NH93 324 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 FAM57AQ8TBR7 257 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 SLC22A8Q8TCC7 542 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 DTX3LQ8TDB6 740 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 BLOC1S5Q8TDH9 187 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 HCAR2Q8TDS4 363 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 L3HYPDHQ96EM0 354 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 RNFT2Q96EX2 444 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 PDLIM5Q96HC4 596 aaKnown RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 CDKN2AIPNLQ96HQ2 116 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 SLC41A2Q96JW4 573 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZNF641Q96N77 438 aaPredicted RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 SIGLEC12Q96PQ1 595 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 SIGLEC11Q96RL6 698 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CCL19Q99731 98 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 NPAS1Q99742 590 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CCDC106Q9BWC9 280 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ERVK-6Q9BXR3 956 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 CADM1Q9BY67 442 aaKnown RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 MRPL1Q9BYD6 325 aaKnown RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 GPR63Q9BZJ6 419 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 PRSS22Q9GZN4 317 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 DERL2Q9GZP9 239 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 NMUR2Q9GZQ4 415 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ATP13A3Q9H7F0 1226 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZNF696Q9H7X3 374 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms