RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CLDN20P56880 219 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 ABCE1P61221 599 aaKnown RBP15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 C17orf67Q0P5P2 114 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 BCL2A1Q16548 175 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 MEIOBQ8N635 442 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 FAM110BQ8TC76 370 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 PIGQQ9BRB3 760 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 PINK1Q9BXM7 581 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 POLDIP3Q9BY77 421 aaKnown RBP15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 C20orf27Q9GZN8 174 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 ACBD3Q9H3P7 528 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 ATAD3AQ9NVI7 634 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 GALNT8Q9NY28 637 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 EIF3LQ9Y262 564 aaKnown RBP15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 NPIPA5A0A0B4J1W7 369 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 A0A1W2PNV4 684 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 NPIPA7E9PJI5 369 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 TM9SF1O15321 606 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 BIRC5O15392 142 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 NGFRP08138 427 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 NPIPA8P0DM63 369 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 PRPS1L1P21108 318 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 TBXA2RP21731 343 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 BGNP21810 368 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 SOAT1P35610 550 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 CCT3P49368 545 aaKnown RBP15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 RNF144AP50876 292 aaPredicted RBP15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 DIO3P55073 304 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 POU6F2P78424 691 aaPredicted RBP15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 MPP2Q14168 576 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 SPDYE7PQ495Y7 208 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 ZCCHC12Q6PEW1 402 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 CHMP1BQ7LBR1 199 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 KIF18BQ86Y91 864 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 RIMKLAQ8IXN7 391 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 OR56A1Q8NGH5 318 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 OR5AK3PQ8NH89 298 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 LINC01560Q8TB33 94 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 FAM222BQ8WU58 562 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 OR5P2Q8WZ92 322 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 FIG4Q92562 907 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 SH3YL1Q96HL8 342 aaPredicted RBP15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 ZNF845Q96IR2 970 aaPredicted RBP15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 STACQ99469 402 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 SORT1Q99523 831 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 KLHDC3Q9BQ90 382 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 RBM24Q9BX46 236 aaKnown RBP15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 BTBD2Q9BX70 525 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 CLEC4MQ9H2X3 399 aaPredicted RBP15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 NOP53Q9NZM5 478 aaKnown RBP15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 PACSIN3Q9UKS6 424 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 DSCAMO60469 2012 aa15.51■□□□□ 0.07
CDC42BPB-208ENST00000561271 C2CD3Q4AC94 2353 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 TUBAL3A6NHL2 446 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 A6NNC1 897 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 ESPNB1AK53 854 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 CFLARO15519 480 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 TNFSF13O75888 250 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 DNAJA1P31689 397 aaKnown RBP15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 CPOXP36551 454 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 SORDQ00796 357 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 CD226Q15762 336 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 TMEM44Q2T9K0 475 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 TNFAIP8L3Q5GJ75 292 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 CDC73Q6P1J9 531 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 CNEP1R1Q8N9A8 125 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 GOT1L1Q8NHS2 421 aaPredicted RBP15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 PSMA8Q8TAA3 256 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 SFXN5Q8TD22 340 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 COQ8BQ96D53 544 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 PRPF18Q99633 342 aaKnown RBP15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 NPAS1Q99742 590 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 DUSP26Q9BV47 211 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 BHLHE41Q9C0J9 482 aaPredicted RBP15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 PIGUQ9H490 435 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 NEUROD4Q9HD90 331 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 KCNK9Q9NPC2 374 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 DUSP22Q9NRW4 184 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 RASSF1Q9NS23 344 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 GPATCH2Q9NW75 528 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 GIN1Q9NXP7 522 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 ASIC5Q9NY37 505 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 RAP2CQ9Y3L5 183 aa15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 RAI1Q7Z5J4 1906 aaPredicted RBP15.5■□□□□ 0.07
CDC42BPB-208ENST00000561271 SCDO00767 359 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 MYZAPP0CAP1 466 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 HPGDP15428 266 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 SLC1A6P48664 564 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 C21orf58P58505 322 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 RPS26P62854 115 aaKnown RBP15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 HBA1P69905 142 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 SIRPAP78324 504 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 EMX2Q04743 252 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 MAD2L1Q13257 205 aaPredicted RBP15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 PON3Q15166 354 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 TESK1Q15569 626 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 PGS1Q32NB8 556 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 LSM12Q3MHD2 195 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms