RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 HMGN4O00479 90 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 BCAS1O75363 584 aaPredicted RBP12.61□□□□□ -0.39
TPM1-230ENST00000561266 IL6P05231 212 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 NGFRP08138 427 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 DPP4P27487 766 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 SRD5A2P31213 254 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 PSMD4P55036 377 aaKnown RBP12.61□□□□□ -0.39
TPM1-230ENST00000561266 GFRA1P56159 465 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 NUP107P57740 925 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 MAPK14Q16539 360 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 KLHL26Q53HC5 615 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 PAGE3Q5JUK9 113 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 BLOC1S3Q6QNY0 202 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 ARSKQ6UWY0 536 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 MSRB3Q8IXL7 192 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 VPS37AQ8NEZ2 397 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 ZFP90Q8TF47 636 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 XAGE5Q8WWM1 108 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 WDYHV1Q96HA8 205 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 VKORC1Q9BQB6 163 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 PAIP1Q9H074 479 aaKnown RBP12.61□□□□□ -0.39
TPM1-230ENST00000561266 MED4Q9NPJ6 270 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 TAS2R10Q9NYW0 307 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 CCDC167Q9P0B6 97 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 MRTO4Q9UKD2 239 aaKnown RBP12.61□□□□□ -0.39
TPM1-230ENST00000561266 A0A0G2JND7 137 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 RFXANKO14593 260 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 BCKDKO14874 412 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 ESRRAP11474 423 aaPredicted RBP12.6□□□□□ -0.39
TPM1-230ENST00000561266 GRNP28799 593 aaKnown RBP12.6□□□□□ -0.39
TPM1-230ENST00000561266 CHI3L1P36222 383 aaPredicted RBP12.6□□□□□ -0.39
TPM1-230ENST00000561266 DCTP40126 519 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 ADH7P40394 386 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 MDH1P40925 334 aaKnown RBP12.6□□□□□ -0.39
TPM1-230ENST00000561266 CASP6P55212 293 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 CLDN15P56746 228 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 PLAURQ03405 335 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 SYPL1Q16563 259 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 AGKQ53H12 422 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 NHSL2Q5HYW2 709 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 CBLN3Q6UW01 205 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 MRGPRGQ86SM5 289 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 ULK2Q8IYT8 1036 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 C10orf111Q8N326 155 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 ANKFN1Q8N957 763 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 OR4K17Q8NGC6 315 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 OR14L1PQ8NHC6 308 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 STON2Q8WXE9 905 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 ABTB1Q969K4 478 aaPredicted RBP12.6□□□□□ -0.39
TPM1-230ENST00000561266 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 ZNF317Q96PQ6 595 aaPredicted RBP12.6□□□□□ -0.39
TPM1-230ENST00000561266 G6PC3Q9BUM1 346 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 TMEM120AQ9BXJ8 343 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 TBL1XR1Q9BZK7 514 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 TP63Q9H3D4 680 aaPredicted RBP12.6□□□□□ -0.39
TPM1-230ENST00000561266 CCDC134Q9H6E4 229 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 UBQLN4Q9NRR5 601 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 ALKBH4Q9NXW9 302 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 SLC25A37Q9NYZ2 338 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 MKLN1Q9UL63 735 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 PCDHB14Q9Y5E9 798 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 HCFC1P51610 2035 aa12.6□□□□□ -0.39
TPM1-230ENST00000561266 INTS1Q8N201 2190 aaKnown RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 H0YC42 278 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 NR5A2O00482 541 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 NDUFB5O43674 189 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 TNFRSF21O75509 655 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 TOXO94900 526 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 KRT16P08779 473 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 GLI4P10075 376 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 NCF2P19878 526 aaPredicted RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 ACVR2AP27037 513 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 LHX2P50458 406 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 ATP4BP51164 291 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 ATP12AP54707 1039 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 GYS2P54840 703 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 TPD52P55327 224 aaPredicted RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 ZNF117Q03924 483 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 PMPCAQ10713 525 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 RCAN2Q14206 197 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 GPR68Q15743 365 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 TMEM44Q2T9K0 475 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 FLYWCH1Q4VC44 716 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 PDZK1Q5T2W1 519 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 WLSQ5T9L3 541 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 TYW3Q6IPR3 259 aaKnown RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 BHLHB9Q6PI77 547 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 RPTNQ6XPR3 784 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 FRRS1Q6ZNA5 592 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 CCDC71Q8IV32 467 aaPredicted RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 ARFGAP2Q8N6H7 521 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 PHF10Q8WUB8 498 aaKnown RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 ROPN1LQ96C74 230 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 SPDL1Q96EA4 605 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 C1GALT1C1Q96EU7 318 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 SH3YL1Q96HL8 342 aaPredicted RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 TTYH2Q9BSA4 534 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 PRDM14Q9GZV8 571 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms