RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 FEVQ99581 238 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 COPS8Q99627 209 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 PIP5K1AQ99755 562 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 MAPKAP1Q9BPZ7 522 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 SLC30A2Q9BRI3 323 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 SYT17Q9BSW7 474 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 FUZQ9BT04 418 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 CENPOQ9BU64 300 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 VN1R3Q9BXE9 311 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 EBPLQ9BY08 206 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 MRPL9Q9BYD2 267 aaKnown RBP2.31□□□□□ -2.04
SPG11-223ENST00000560858 KRTAP4-3Q9BYR4 195 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 TM6SF2Q9BZW4 377 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 SRRQ9GZT4 340 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 C6orf62Q9GZU0 229 aaPredicted RBP2.31□□□□□ -2.04
SPG11-223ENST00000560858 OR51E2Q9H255 320 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 TPK1Q9H3S4 243 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 ELOVL6Q9H5J4 265 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 TPT1P8Q9HAU6 139 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 SLC25A19Q9HC21 320 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 NEK6Q9HC98 313 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 HHATLQ9HCP6 504 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 MYNNQ9NPC7 610 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 CCDC177Q9NQR7 707 aaPredicted RBP2.31□□□□□ -2.04
SPG11-223ENST00000560858 DYRK4Q9NR20 520 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 POLE4Q9NR33 117 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 ABCB10Q9NRK6 738 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 RASSF1Q9NS23 344 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 SACM1LQ9NTJ5 587 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 ABCB8Q9NUT2 735 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 NDUFB11Q9NX14 153 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 ADPRHL2Q9NX46 363 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 ARL15Q9NXU5 204 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 STOX2Q9P2F5 926 aaPredicted RBP2.31□□□□□ -2.04
SPG11-223ENST00000560858 CRNNQ9UBG3 495 aaPredicted RBP2.31□□□□□ -2.04
SPG11-223ENST00000560858 VPS29Q9UBQ0 182 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 AASSQ9UDR5 926 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 AFF4Q9UHB7 1163 aaKnown RBP2.31□□□□□ -2.04
SPG11-223ENST00000560858 POU2F3Q9UKI9 436 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 ACAD8Q9UKU7 415 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 ZDHHC8Q9ULC8 765 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 TBC1D24Q9ULP9 559 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 FZD4Q9ULV1 537 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 VPS4AQ9UN37 437 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 STUB1Q9UNE7 303 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 DUSP12Q9UNI6 340 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 EXO1Q9UQ84 846 aaKnown RBP2.31□□□□□ -2.04
SPG11-223ENST00000560858 ANGPT4Q9Y264 503 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 HS3ST2Q9Y278 367 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 TMEM98Q9Y2Y6 226 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 PCDHGB6Q9Y5F9 930 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 ENPP4Q9Y6X5 453 aa2.31□□□□□ -2.04
SPG11-223ENST00000560858 C2orf16Q68DN1 1984 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 MYO10Q9HD67 2058 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 A0A0B4J293 547 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 SLC5A10A0PJK1 596 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 HYKKA2RU49 373 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 GABRR3A8MPY1 467 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 WASH3PC4AMC7 463 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 NT5C1B-RDH14C9J2C7 533 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 E7EQ34 232 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 M0R129 80 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 PSMD11O00231 422 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 FOXE1O00358 373 aaPredicted RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 HOXC11O43248 304 aaPredicted RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 ZW10O43264 779 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 IDH3BO43837 385 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 SSX4O60224 188 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 TSPAN3O60637 253 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 CSO75390 466 aaKnown RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 GPX5O75715 221 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 ZNF432O94892 652 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 SEMA3DO95025 777 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 CELF2O95319 508 aaKnown RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 ETHE1O95571 254 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 PLGP00747 810 aaPredicted RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 VIPP01282 170 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 IL1AP01583 271 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 APOA1P02647 267 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 OPN1SWP03999 348 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 CATP04040 527 aaKnown RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 GALTP07902 379 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 HBQ1P09105 142 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 ANXA4P09525 319 aaPredicted RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 IRF1P10914 325 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 IL7P13232 177 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 ETFAP13804 333 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 ATP1B2P14415 290 aaPredicted RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 ZNF8P17098 575 aaPredicted RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 ALOX12P18054 663 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 CD72P21854 359 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 TCEA1P23193 301 aaKnown RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 ELAVL4P26378 380 aaKnown RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 GTF2E2P29084 291 aaKnown RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 CCND3P30281 292 aaPredicted RBP2.3□□□□□ -2.04
SPG11-223ENST00000560858 HLA-FP30511 346 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 TNFSF8P32971 234 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 RCVRNP35243 200 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 SOX6P35712 828 aa2.3□□□□□ -2.04
SPG11-223ENST00000560858 OPRD1P41143 372 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms