RNA–Protein interactions for RNA: ENST00000560853.5

LINC00593-202, long intergenic non-protein coding RNA 593, humanhuman

TSL 1 (best) BASIC

Gene LINC00593, Length 1,483 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-202ENST00000560853 R3HCC1LQ7Z5L2 792 aaKnown RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 KIRREL3Q8IZU9 778 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 CDRT4Q8N9R6 151 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 GOT1L1Q8NHS2 421 aaPredicted RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 LRRC8CQ8TDW0 803 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 DYDC1Q8WWB3 177 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 C1GALT1C1Q96EU7 318 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 GIMAP5Q96F15 307 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 PPP3R2Q96LZ3 170 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 C7orf26Q96N11 449 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 YIPF4Q9BSR8 244 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 LIME1Q9H400 295 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 ACSS1Q9NUB1 689 aaPredicted RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 ZNF337Q9Y3M9 751 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 ZFHX3Q15911 3703 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 MTORP42345 2549 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 ZNF469Q96JG9 3925 aaPredicted RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 OR2M5A3KFT3 312 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 FAM221AA4D161 298 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 SLC22A20A6NK97 555 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 H0YC42 278 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 H3BML4 177 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 EMC8O43402 210 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 HCRTR2O43614 444 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 SKAP2O75563 359 aaPredicted RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 ACP2P11117 423 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 EPXP11678 715 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 MAPK1P28482 360 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 MAP3K8P41279 467 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 SUCLG1P53597 346 aaKnown RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 IST1P53990 364 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 TPD52P55327 224 aaPredicted RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 PRR5P85299 388 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 SORDQ00796 357 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 C17orf67Q0P5P2 114 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 DUSP5Q16690 384 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 ATP6AP1LQ52LC2 224 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 CDC20BQ86Y33 519 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 SLC16A11Q8NCK7 471 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 OR7A2PQ8NGA2 310 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 SMPDL3BQ92485 455 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 JADE3Q92613 823 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 HOXB13Q92826 284 aaPredicted RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 MTERF3Q96E29 417 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 OTUB1Q96FW1 271 aaPredicted RBP13.55□□□□□ -0.24
LINC00593-202ENST00000560853 C16orf58Q96GQ5 468 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 PIGQQ9BRB3 760 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 C1orf50Q9BV19 199 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 CCDC134Q9H6E4 229 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 SLCO1B3Q9NPD5 702 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 PNPOQ9NVS9 261 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 GALNT8Q9NY28 637 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 NTMQ9P121 344 aa13.55□□□□□ -0.24
LINC00593-202ENST00000560853 VPS13CQ709C8 3753 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 A0A1W2PNV4 684 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 SHISA8B8ZZ34 492 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
LINC00593-202ENST00000560853 TNFSF13O75888 250 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 KCNK2O95069 426 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 ALOX5P09917 674 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 DDX5P17844 614 aaKnown RBP13.54□□□□□ -0.24
LINC00593-202ENST00000560853 CLDN15P56746 228 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 CLDN20P56880 219 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 EEFSECP57772 596 aaKnown RBP13.54□□□□□ -0.24
LINC00593-202ENST00000560853 PTGR1Q14914 329 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 DAZAP2Q15038 168 aaPredicted RBP13.54□□□□□ -0.24
LINC00593-202ENST00000560853 MFSD12Q6NUT3 480 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 COX18Q8N8Q8 333 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 CNEP1R1Q8N9A8 125 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 GATSQ8NAP1 163 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 OR4C3Q8NH37 302 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 FIG4Q92562 907 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 FAM120BQ96EK7 910 aaKnown RBP13.54□□□□□ -0.24
LINC00593-202ENST00000560853 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 C3orf30Q96M34 536 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 PIGMQ9H3S5 423 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 CCM2LQ9NUG4 571 aaPredicted RBP13.54□□□□□ -0.24
LINC00593-202ENST00000560853 ATP6V1HQ9UI12 483 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 ST6GALNAC2Q9UJ37 374 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 PACSIN3Q9UKS6 424 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 VDAC3Q9Y277 283 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 SNX8Q9Y5X2 465 aa13.54□□□□□ -0.24
LINC00593-202ENST00000560853 PRRC2AP48634 2157 aaKnown RBP13.53□□□□□ -0.24
LINC00593-202ENST00000560853 NUP214P35658 2090 aaPredicted RBP13.53□□□□□ -0.24
LINC00593-202ENST00000560853 IGLV3-32A0A0A0MS00 114 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 A0A1W2PRB8 838 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 LINC01387J3KSC0 135 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 ZNF195O14628 629 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 NDUFB5O43674 189 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 SMNDC1O75940 238 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00593-202ENST00000560853 OXSR1O95747 527 aaPredicted RBP13.53□□□□□ -0.24
LINC00593-202ENST00000560853 LAMP1P11279 417 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 CD1EP15812 388 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 CPOXP36551 454 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 RPL3P39023 403 aaKnown RBP13.53□□□□□ -0.24
LINC00593-202ENST00000560853 PRIM2P49643 509 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 DIO3P55073 304 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 IL23RQ5VWK5 629 aa13.53□□□□□ -0.24
LINC00593-202ENST00000560853 OR2A2Q6IF42 318 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms