RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 HRASLS5Q96KN8 279 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 DDA1Q9BW61 102 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 WWTR1Q9GZV5 400 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 NXF5Q9H1B4 397 aaKnown RBP13.36□□□□□ -0.27
ZEB1-218ENST00000560196 C19orf25Q9UFG5 118 aaPredicted RBP13.36□□□□□ -0.27
ZEB1-218ENST00000560196 GPN3Q9UHW5 284 aaPredicted RBP13.36□□□□□ -0.27
ZEB1-218ENST00000560196 LOXL2Q9Y4K0 774 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 TRAPPC13A5PLN9 417 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 CLDN24A6NM45 220 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 C4orf47A7E2U8 309 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 C9J4A7 227 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 FRS3O43559 492 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 GASTP01350 101 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 SMIM18P0DKX4 95 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF28P17035 718 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 POLR2IP36954 125 aaKnown RBP13.35□□□□□ -0.27
ZEB1-218ENST00000560196 UGT2B15P54855 530 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 ISL1P61371 349 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 ESRRGP62508 458 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 PLAURQ03405 335 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 COX10Q12887 443 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 ISXQ2M1V0 245 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 KLHL26Q53HC5 615 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 DCAF12Q5T6F0 453 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 PGBD2Q6P3X8 592 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 CPEB2Q7Z5Q1 589 aaKnown RBP13.35□□□□□ -0.27
ZEB1-218ENST00000560196 GLRX5Q86SX6 157 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 SLCO6A1Q86UG4 719 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF440Q8IYI8 595 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 B3GNT7Q8NFL0 401 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 OR8K3Q8NH51 312 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 HDAC2Q92769 488 aaKnown RBP13.35□□□□□ -0.27
ZEB1-218ENST00000560196 TAAR9Q96RI9 348 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 APOL4Q9BPW4 351 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 NIPSNAP1Q9BPW8 284 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF559Q9BR84 538 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 CRB3Q9BUF7 120 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 MRPS26Q9BYN8 205 aaKnown RBP13.35□□□□□ -0.27
ZEB1-218ENST00000560196 ULBP3Q9BZM4 244 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 SLC35A3Q9Y2D2 325 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 GMPPBQ9Y5P6 360 aa13.35□□□□□ -0.27
ZEB1-218ENST00000560196 LOC102723996A0A087X1L8 192 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 CPSF4LA6NMK7 179 aaKnown RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 AGRPO00253 132 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 GDF9O60383 454 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 OR10H3O60404 316 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 NGFRP08138 427 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 IFNGR2P38484 337 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 TPD52P55327 224 aaPredicted RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 NUP107P57740 925 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 RPP38P78345 283 aaKnown RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 IL1RL1Q01638 556 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 ALDH6A1Q02252 535 aaKnown RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 EIF3IQ13347 325 aaKnown RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 TOP3AQ13472 1001 aaPredicted RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 APOFQ13790 326 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 RBM48Q5RL73 367 aaKnown RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 FAAH2Q6GMR7 532 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 C1orf94Q6P1W5 598 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF613Q6PF04 617 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 SHISA6Q6ZSJ9 500 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 RAB11FIP2Q7L804 512 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF550Q7Z398 422 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 GDF7Q7Z4P5 450 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 APLFQ8IW19 511 aaPredicted RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 SLC34A3Q8N130 599 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF527Q8NB42 609 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 PRSS33Q8NF86 280 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 OR4K5Q8NGD3 323 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 NUBPLQ8TB37 319 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 ADAMTS16Q8TE57 1224 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 ACOT11Q8WXI4 607 aaPredicted RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 CNOT9Q92600 299 aaKnown RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 MR1Q95460 341 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 VMP1Q96GC9 406 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 SLC41A3Q96GZ6 507 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 LPAR4Q99677 370 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 WDR77Q9BQA1 342 aaPredicted RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 UCK2Q9BZX2 261 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 ING2Q9H160 280 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 PARD6AQ9NPB6 346 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 UBQLN4Q9NRR5 601 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 DNAJB12Q9NXW2 375 aaKnown RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 TUBA8Q9NY65 449 aaPredicted RBP13.34□□□□□ -0.27
ZEB1-218ENST00000560196 NCDNQ9UBB6 729 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 NINQ8N4C6 2090 aa13.34□□□□□ -0.27
ZEB1-218ENST00000560196 A0A087WUU8 490 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 SERINC4A6NH21 518 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 A6NHS1 94 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 TRIM64CA6NLI5 447 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 TSPAN2O60636 221 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 LYPD3O95274 346 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 MT-CO3P00414 261 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 OSMP13725 252 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 PRG2P13727 222 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 GSTM3P21266 225 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 TBXA2RP21731 343 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 TGM1P22735 817 aa13.33□□□□□ -0.28
ZEB1-218ENST00000560196 HTR2AP28223 471 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms