RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RIT2Q99578 217 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 SLC30A2Q9BRI3 323 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 C11orf70Q9BRQ4 267 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 RPP25Q9BUL9 199 aaKnown RBP3.02□□□□□ -1.93
SPG11-218ENST00000559754 ROPN1BQ9BZX4 212 aaPredicted RBP3.02□□□□□ -1.93
SPG11-218ENST00000559754 IL1RL2Q9HB29 575 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 MCCC2Q9HCC0 563 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 SLC2A8Q9NY64 477 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 KLRF1Q9NZS2 232 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 GHRLQ9UBU3 117 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 LCMT1Q9UIC8 334 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 EMCNQ9ULC0 261 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 EIF3LQ9Y262 564 aaKnown RBP3.02□□□□□ -1.93
SPG11-218ENST00000559754 ATP10AO60312 1499 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 A0A1B0GTQ1 180 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 A8MU10 97 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 FOXE1O00358 373 aaPredicted RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 IMPA2O14732 288 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 POLR2DO15514 142 aaKnown RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 DUX1O43812 170 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TIMM8AO60220 97 aaPredicted RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 CDH16O75309 829 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 ANXA9O76027 345 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TOXO94900 526 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TSPAN12O95859 305 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 OTCP00480 354 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 KRT6AP02538 564 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TPSB2P20231 275 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TBXA2RP21731 343 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 PTBP1P26599 531 aaKnown RBP eCLIP3.01□□□□□ -1.933e-11■■■□□ 17
SPG11-218ENST00000559754 LAP3P28838 519 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 EPS15P42566 896 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 MAGEA8P43361 318 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 OR3A2P47893 321 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 AP3M2P53677 418 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 EIF3EP60228 445 aaKnown RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 CSNK2BP67870 215 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 NOP14P78316 857 aaKnown RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 IL9RQ01113 521 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 DOC2AQ14183 400 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TFDP1Q14186 410 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TPSAB1Q15661 275 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 MAPK6Q16659 721 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TMEM44Q2T9K0 475 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 HIGD2BQ4VC39 106 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 RFTN2Q52LD8 501 aaPredicted RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 SPANXN4Q5MJ08 99 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 RHBDD2Q6NTF9 364 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 STEAP1BQ6NZ63 245 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 Q6ZVQ6 151 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 Q7L0L9 218 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 ANKRD37Q7Z713 158 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TGIF2LXQ8IUE1 241 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 SLC38A6Q8IZM9 456 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 TMEM123Q8N131 208 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 CENPSQ8N2Z9 138 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 METTL4Q8N3J2 472 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 PDCL2Q8N4E4 241 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 COMMD1Q8N668 190 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 CLDN19Q8N6F1 224 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 POM121L12Q8N7R1 296 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 CEP112Q8N8E3 955 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 ZNF321PQ8N8H1 164 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 OR4C5Q8NGB2 326 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 OR4D10Q8NGI6 311 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 KCNG3Q8TAE7 436 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 MRPL24Q96A35 216 aaKnown RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 ADIPOR1Q96A54 375 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 UPRTQ96BW1 309 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 ELMO2Q96JJ3 720 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 AMDHD1Q96NU7 426 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 FEM1AQ9BSK4 669 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 PAPOLGQ9BWT3 736 aaKnown RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 TDRD1Q9BXT4 1180 aaKnown RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 PARD6BQ9BYG5 372 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 IQCGQ9H095 443 aaKnown RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 AUNIPQ9H7T9 357 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 UBE2TQ9NPD8 197 aaPredicted RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 B3GAT2Q9NPZ5 323 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 MBD2Q9UBB5 411 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 GNG12Q9UBI6 72 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 PURGQ9UJV8 347 aaKnown RBP3.01□□□□□ -1.93
SPG11-218ENST00000559754 ADAM28Q9UKQ2 775 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 SELENOKQ9Y6D0 94 aa3.01□□□□□ -1.93
SPG11-218ENST00000559754 NEDD4P46934 1319 aa3□□□□□ -1.93
SPG11-218ENST00000559754 hCG_38984A0A1B0GV85 526 aa3□□□□□ -1.93
SPG11-218ENST00000559754 ESYT2A0FGR8 921 aa3□□□□□ -1.93
SPG11-218ENST00000559754 NPIPA7E9PJI5 369 aa3□□□□□ -1.93
SPG11-218ENST00000559754 H3BMH7 237 aa3□□□□□ -1.93
SPG11-218ENST00000559754 TFECO14948 347 aaPredicted RBP3□□□□□ -1.93
SPG11-218ENST00000559754 NBR2O15453 112 aa3□□□□□ -1.93
SPG11-218ENST00000559754 B4GAT1O43505 415 aa3□□□□□ -1.93
SPG11-218ENST00000559754 RNF13O43567 381 aa3□□□□□ -1.93
SPG11-218ENST00000559754 UPK3AO75631 287 aa3□□□□□ -1.93
SPG11-218ENST00000559754 ANGPTL1O95841 491 aa3□□□□□ -1.93
SPG11-218ENST00000559754 ECDO95905 644 aaPredicted RBP3□□□□□ -1.93
SPG11-218ENST00000559754 PAHP00439 452 aa3□□□□□ -1.93
SPG11-218ENST00000559754 CRYGBP07316 175 aa3□□□□□ -1.93
SPG11-218ENST00000559754 NPIPA8P0DM63 369 aa3□□□□□ -1.93
SPG11-218ENST00000559754 POU2F1P14859 743 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms