RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 L2HGDHQ9H9P8 463 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 SH3BP4Q9P0V3 963 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 TLDC2A0PJX2 215 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 ALG1L2C9J202 215 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 CTIFO43310 598 aaKnown RBP12.16□□□□□ -0.46
VPS18-203ENST00000558855 RGS14O43566 566 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 EFNA2O43921 213 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 TRIM13O60858 407 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 TNFRSF21O75509 655 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 THBDP07204 575 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 LAMP1P11279 417 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 HOXC12P31275 282 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 GPC1P35052 558 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 CD79BP40259 229 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 VSNL1P62760 191 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 PSPHP78330 225 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 GANABQ14697 944 aaKnown RBP12.16□□□□□ -0.46
VPS18-203ENST00000558855 PTGR1Q14914 329 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS18-203ENST00000558855 PLPPR5Q32ZL2 321 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 NDUFAF6Q330K2 333 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS18-203ENST00000558855 ANKRD34AQ69YU3 496 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 OLIG3Q7RTU3 272 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 SZRD1Q7Z422 152 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 MEIOBQ8N635 442 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 EIF1ADQ8N9N8 165 aaKnown RBP12.16□□□□□ -0.46
VPS18-203ENST00000558855 FAM120BQ96EK7 910 aaKnown RBP12.16□□□□□ -0.46
VPS18-203ENST00000558855 SH3YL1Q96HL8 342 aaPredicted RBP12.16□□□□□ -0.46
VPS18-203ENST00000558855 MS4A4EQ96PG1 132 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 C1orf50Q9BV19 199 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 TBL1XR1Q9BZK7 514 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 TMEM185BQ9H7F4 350 aa12.16□□□□□ -0.46
VPS18-203ENST00000558855 A0A0J9YW62 118 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 H3BQF6 201 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 EMC8O43402 210 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 NID1P14543 1247 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 UGT2B10P36537 528 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 PRIM2P49643 509 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 DIO3P55073 304 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 MANFP55145 182 aaKnown RBP12.15□□□□□ -0.46
VPS18-203ENST00000558855 KEAP1Q14145 624 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 ZNHIT3Q15649 155 aaPredicted RBP12.15□□□□□ -0.46
VPS18-203ENST00000558855 Q71RC1 249 aaPredicted RBP12.15□□□□□ -0.46
VPS18-203ENST00000558855 DDIASQ8IXT1 998 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 KRTCAP2Q8N6L1 136 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 CDRT4Q8N9R6 151 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 CHDHQ8NE62 594 aaPredicted RBP12.15□□□□□ -0.46
VPS18-203ENST00000558855 OR6Y1Q8NGX8 325 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 CDS1Q92903 461 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 ZC3HAV1LQ96H79 300 aaKnown RBP12.15□□□□□ -0.46
VPS18-203ENST00000558855 METTL2AQ96IZ6 378 aaKnown RBP12.15□□□□□ -0.46
VPS18-203ENST00000558855 RNF145Q96MT1 663 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 ACBD3Q9H3P7 528 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 SERHL2Q9H4I8 314 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 CXorf36Q9H7Y0 433 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 ZNF395Q9H8N7 513 aaPredicted RBP12.15□□□□□ -0.46
VPS18-203ENST00000558855 SDHAF3Q9NRP4 125 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 GIN1Q9NXP7 522 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 ATP6V1HQ9UI12 483 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 ZDHHC2Q9UIJ5 367 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 WBP11Q9Y2W2 641 aaKnown RBP12.15□□□□□ -0.46
VPS18-203ENST00000558855 TRAF6Q9Y4K3 522 aa12.15□□□□□ -0.46
VPS18-203ENST00000558855 A0A1W2PRB8 838 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 EIF1AYO14602 144 aaKnown RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 SCAMP2O15127 329 aaKnown RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 CXCL13O43927 109 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 PEX11AO75192 247 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 SKAP2O75563 359 aaPredicted RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 KCNH1O95259 989 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 NTN1O95631 604 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 CRHP06850 196 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 FGF4P08620 206 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 NEFHP12036 1026 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 TBXA2RP21731 343 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 CRYGSP22914 178 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 EIF1AXP47813 144 aaKnown RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 NAA20P61599 178 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 PPP2R2AP63151 447 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 C17orf67Q0P5P2 114 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 LASP1Q14847 261 aaKnown RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 TOMM34Q15785 309 aaPredicted RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 CBLN3Q6UW01 205 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 CAMKMTQ7Z624 323 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 CIARTQ8N365 385 aaPredicted RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 OR10D3Q8NH80 312 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 TCP10LQ8TDR4 215 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 ZBTB9Q96C00 473 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 ZBED6CLQ96FA7 236 aaPredicted RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 PIK3IP1Q96FE7 263 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 PTGES2Q9H7Z7 377 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 ACSS1Q9NUB1 689 aaPredicted RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 ZCCHC3Q9NUD5 404 aaKnown RBP12.14□□□□□ -0.47
VPS18-203ENST00000558855 MED17Q9NVC6 651 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 LGALS13Q9UHV8 139 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 ZNF175Q9Y473 711 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 ZANQ9Y493 2812 aa12.14□□□□□ -0.47
VPS18-203ENST00000558855 NSD1Q96L73 2696 aaPredicted RBP12.13□□□□□ -0.47
VPS18-203ENST00000558855 CENPVL1A0A0U1RR11 272 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 TNFSF11O14788 317 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms