RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 NSUN5Q96P11 429 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-204ENST00000558394 TMEM185BQ9H7F4 350 aa15.84■□□□□ 0.13
TSPAN3-204ENST00000558394 TIGARQ9NQ88 270 aa15.84■□□□□ 0.13
TSPAN3-204ENST00000558394 VPS29Q9UBQ0 182 aa15.84■□□□□ 0.13
TSPAN3-204ENST00000558394 MCM8Q9UJA3 840 aa15.84■□□□□ 0.13
TSPAN3-204ENST00000558394 PCTPQ9UKL6 214 aa15.84■□□□□ 0.13
TSPAN3-204ENST00000558394 FREM1Q5H8C1 2179 aa15.83■□□□□ 0.13
TSPAN3-204ENST00000558394 IGLV3-32A0A0A0MS00 114 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 ELOA3DA6NLF2 546 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 STX16-NPEPL1H3BU86 382 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 CCDC188H7C350 402 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 STX16O14662 325 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 WIPF1O43516 503 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 PCDH7O60245 1069 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 RAMP1O60894 148 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 SMIM24O75264 130 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 UTS2O95399 124 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 ZNF41P51814 821 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 CSTF3Q12996 717 aaKnown RBP15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 ITGADQ13349 1161 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 PPA1Q15181 289 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 ELOA3BQ3SY89 546 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 BHLHA15Q7RTS1 189 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 GTPBP8Q8N3Z3 284 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 ARIH2OSQ8N7S6 290 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 CDYL2Q8N8U2 506 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 ELOA3Q8NG57 546 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 FBF1Q8TES7 1133 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 ZBTB8AQ96BR9 441 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 HBEGFQ99075 208 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 MANSC1Q9H8J5 431 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 CHODLQ9H9P2 273 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 POU2F3Q9UKI9 436 aa15.83■□□□□ 0.12
TSPAN3-204ENST00000558394 A0A0J9YW62 118 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 ABCD4O14678 606 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 SLITRK5O94991 958 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 KCNH1O95259 989 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 NTN1O95631 604 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 TYK2P29597 1187 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 GZMKP49863 264 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 IRX1P78414 480 aaPredicted RBP15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 PRR5P85299 388 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 TECRLQ5HYJ1 363 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 FAM166AQ6J272 317 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 SSX8Q7RTT4 187 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 NUFIP2Q7Z417 695 aaKnown RBP15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 TUSC5Q8IXB3 177 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 FBXL14Q8N1E6 418 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 ZNF525Q8N782 197 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 OR2W6PQ8NHA6 318 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 ABHD3Q8WU67 409 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 PROX1Q92786 737 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 MRRFQ96E11 262 aaKnown RBP15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 RADILQ96JH8 1075 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 RNF145Q96MT1 663 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 SHCBP1LQ9BZQ2 653 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 VPS11Q9H270 941 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 DPH5Q9H2P9 285 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 CBLN4Q9NTU7 201 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 DDX18Q9NVP1 670 aaKnown RBP15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 KLHL13Q9P2N7 655 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 MALRD1Q5VYJ5 2156 aa15.82■□□□□ 0.12
TSPAN3-204ENST00000558394 A0A087WV62 115 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 SHISA9B4DS77 424 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 RBP1P09455 135 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 CSF3P09919 207 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 CTAGE8P0CG41 777 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 IGHV4-31P0DP07 118 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 USF1P22415 310 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 NCBP2P52298 156 aaKnown RBP eCLIP15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 LSM11P83369 360 aaKnown RBP eCLIP15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 SQLEQ14534 574 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 TCHHL1Q5QJ38 904 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 CPTPQ5TA50 214 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 TMEM107Q6UX40 140 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 IL17RELQ6ZVW7 336 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 TDRPQ86YL5 185 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 CTAGE4Q8IX94 777 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 RNF128Q8TEB7 428 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 CPNE4Q96A23 557 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 KLHL15Q96M94 604 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 L2HGDHQ9H9P8 463 aa15.81■□□□□ 0.12
TSPAN3-204ENST00000558394 A0A1W2PRB8 838 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 PRKD3O94806 890 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 KRT6AP02538 564 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 KRT6BP04259 564 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 JUNP05412 331 aaKnown RBP15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 PGRP06401 933 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 BMP4P12644 408 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 HSD3B1P14060 373 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 IGFBP5P24593 272 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 HSD3B2P26439 372 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 TTKP33981 857 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 GABRA3P34903 492 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 SFTPDP35247 375 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 PAFAH1B1P43034 410 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 KRT6CP48668 564 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 SERPINB8P50452 374 aa15.8■□□□□ 0.12
TSPAN3-204ENST00000558394 ACSM2AQ08AH3 577 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms