RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 GHDCQ8N2G8 530 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 ANKS4BQ8N8V4 417 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 GATSQ8NAP1 163 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 THUMPD3Q9BV44 507 aaKnown RBP23.29■■□□□ 1.32
SMAD6-202ENST00000557916 RP1L1Q8IWN7 2480 aaPredicted RBP23.29■■□□□ 1.32
SMAD6-202ENST00000557916 SVILO95425 2214 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 TMEM247A6NEH6 219 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 TNFRSF21O75509 655 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 DCTN3O75935 186 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 NPPAP01160 153 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 CHRM4P08173 479 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 NUDT7P0C024 238 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 TFPTP0C1Z6 253 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 BMP2P12643 396 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 MRPL49Q13405 166 aaKnown RBP23.28■■□□□ 1.32
SMAD6-202ENST00000557916 ZNF619Q8N2I2 560 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 ZNF614Q8N883 585 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 OR4K17Q8NGC6 315 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 LRRC58Q96CX6 371 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 RCN3Q96D15 328 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 LRRC37BQ96QE4 947 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 DSN1Q9H410 356 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 HHATLQ9HCP6 504 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 KCNE5Q9UJ90 142 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 FBXL2Q9UKC9 423 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 DTNAQ9Y4J8 743 aa23.28■■□□□ 1.32
SMAD6-202ENST00000557916 J3QKU1 62 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 KIAA0513O60268 411 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 BCHEP06276 602 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 RNF144AP50876 292 aaPredicted RBP23.27■■□□□ 1.32
SMAD6-202ENST00000557916 HSF1Q00613 529 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 MAPK11Q15759 364 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 ZNF141Q15928 474 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 PDZK1Q5T2W1 519 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 MISPQ8IVT2 679 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 C10orf111Q8N326 155 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 CCDC197Q8NCU1 140 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 SLC38A5Q8WUX1 472 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 CMTM5Q96DZ9 223 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 TRIM8Q9BZR9 551 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 SLC38A1Q9H2H9 487 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 LDAHQ9H6V9 325 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 RUBCNLQ9H714 662 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 ACKR4Q9NPB9 350 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 PLSCR2Q9NRY7 297 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 GID8Q9NWU2 228 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 MED11Q9P086 117 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 LIPGQ9Y5X9 500 aa23.27■■□□□ 1.32
SMAD6-202ENST00000557916 B4DXG7 233 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 H3BNH8 94 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 UGT2B17O75795 530 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 IGHG3P01860 377 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 HPNP05981 417 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 GNLYP22749 145 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 MTPNP58546 118 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 SELPLGQ14242 412 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 GNA13Q14344 377 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 CD226Q15762 336 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 GCNT6Q5T4J0 391 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 FADS6Q8N9I5 356 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 PHOSPHO1Q8TCT1 267 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 MAL2Q969L2 176 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 ZG16BQ96DA0 208 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 SLC39A3Q9BRY0 314 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 A4GALTQ9NPC4 353 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 CALML5Q9NZT1 146 aa23.26■■□□□ 1.31
SMAD6-202ENST00000557916 IGLV3-32A0A0A0MS00 114 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 FXYD1O00168 92 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 UQCRFS1P47985 274 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 CRISP3P54108 245 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 NANOGP8Q6NSW7 305 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 TRILQ7L0X0 811 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 MTERF4Q7Z6M4 381 aaKnown RBP23.25■■□□□ 1.31
SMAD6-202ENST00000557916 OR2M3Q8NG83 312 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 DTNBP1Q96EV8 351 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 TMEM19Q96HH6 336 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 MTHFD2LQ9H903 347 aaPredicted RBP23.25■■□□□ 1.31
SMAD6-202ENST00000557916 NANOGQ9H9S0 305 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 TRGV5A0A0B4J1U4 118 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 CENPVL1A0A0U1RR11 272 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 A0A1B0GTH9 108 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 SERINC4A6NH21 518 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 AIM2O14862 343 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 PRDX6P30041 224 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 RBPJQ06330 500 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 MAPK14Q16539 360 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 ARHGAP11AQ6P4F7 1023 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 HMGN2P46Q86SG4 172 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 OIT3Q8WWZ8 545 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 PMM1Q92871 262 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 SH3GL1Q99961 368 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 QRSL1Q9H0R6 528 aaKnown RBP23.25■■□□□ 1.31
SMAD6-202ENST00000557916 SLC6A15Q9H2J7 730 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 EXO5Q9H790 373 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 PTGES2Q9H7Z7 377 aa23.25■■□□□ 1.31
SMAD6-202ENST00000557916 GTPBP1O00178 669 aaKnown RBP23.24■■□□□ 1.31
SMAD6-202ENST00000557916 ZNHIT1O43257 154 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 SUSD5O60279 629 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 HCN1O60741 890 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 DPP4P27487 766 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms