RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 MMACHCQ9Y4U1 282 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 PCDHGA8Q9Y5G5 932 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 HEMK1Q9Y5R4 338 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 SPEGQ15772 3267 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 SPTBP11277 2137 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ARRDC5A6NEK1 342 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 AGAP5A6NIR3 686 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 TRIM64CA6NLI5 447 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 A8MUA0 341 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 NPIPB9F8W1W9 429 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 PEX12O00623 359 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 BCKDKO14874 412 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 PRKNO60260 465 aaPredicted RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 KIAA0513O60268 411 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 STX11O75558 287 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 SEC24DO94855 1032 aaPredicted RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 CCNB2O95067 398 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 NTN1O95631 604 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 DDAH2O95865 285 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 GASTP01350 101 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 THY1P04216 161 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 IFNA16P05015 189 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 H1F0P07305 194 aaKnown RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 GUSBP08236 651 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 LINGO3P0C6S8 592 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 CT45A8P0DMV1 189 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 CT45A9P0DMV2 189 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 CYP4B1P13584 511 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ELK4P28324 431 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 TRHRP34981 398 aaPredicted RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 PGDP52209 483 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 MAPK10P53779 464 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 RAD23AP54725 363 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 POU6F2P78424 691 aaPredicted RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 DAB2P98082 770 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 HOXC5Q00444 222 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 IL1RL1Q01638 556 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ZFP36L1Q07352 338 aaKnown RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 CD47Q08722 323 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 EPS8Q12929 822 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 RAPSNQ13702 412 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 GPR68Q15743 365 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 KCTD21Q4G0X4 260 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 CT45A2Q5DJT8 189 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 COLEC12Q5KU26 742 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ARHGAP40Q5TG30 622 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 FOXB2Q5VYV0 432 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 LAIR1Q6GTX8 287 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 RHBDD2Q6NTF9 364 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 PODNL1Q6PEZ8 512 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 Q6ZPB1 254 aaPredicted RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 PRSS58Q8IYP2 241 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ZNF619Q8N2I2 560 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ZNF786Q8N393 782 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 AMER2Q8N7J2 671 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 COX18Q8N8Q8 333 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 AQP11Q8NBQ7 271 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ZNF555Q8NEP9 628 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 C16orf52Q8NHV5 167 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 GPR151Q8TDV0 419 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ATOH1Q92858 354 aaPredicted RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 RMND5BQ96G75 393 aaPredicted RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 SENP5Q96HI0 755 aaPredicted RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 LOXL4Q96JB6 756 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 PTCHD1Q96NR3 888 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ALPK1Q96QP1 1244 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 OR6C1Q96RD1 312 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 PITX2Q99697 317 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 CNPPD1Q9BV87 410 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 ITPAQ9BY32 194 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 GABARAPL3Q9BY60 117 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 MRPS26Q9BYN8 205 aaKnown RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 VN1R1Q9GZP7 353 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 OR10A5Q9H207 317 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 SYNDIG1Q9H7V2 258 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 FANCEQ9HB96 536 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 APMAPQ9HDC9 416 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 CTPS2Q9NRF8 586 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 KRT84Q9NSB2 600 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 OCIAD1Q9NX40 245 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 CTSFQ9UBX1 484 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 AASSQ9UDR5 926 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 NDRG4Q9ULP0 352 aaKnown RBP6.82□□□□□ -1.32
SPG11-204ENST00000557866 SLC9A8Q9Y2E8 581 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 MYRFQ9Y2G1 1151 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 IFT52Q9Y366 437 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 R4GN57 208 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 GPR179Q6PRD1 2367 aa6.82□□□□□ -1.32
SPG11-204ENST00000557866 IGLV3-12A0A075B6K2 115 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 A0A1W2PRQ8 180 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 TCRBV16S1A1N1A0A5B0 115 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 SH3PXD2BA1X283 911 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 FAM86C2PA6NEL3 165 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 C17orf105B2RV13 164 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 D6RAR5 112 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 FAAHO00519 579 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 BRINP1O60477 761 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PRAMEF2O60811 474 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 UGT2B11O75310 529 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 UGT2B17O75795 530 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms