RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 IGHV1-2P23083 117 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 ATP5A1P25705 553 aaKnown RBP3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 MAGEA5P43359 124 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 GNPDA1P46926 289 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 TAF6P49848 677 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 HSD17B7P56937 341 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 ERVPABLB-1P60509 514 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 RND3P61587 244 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 CSTF1Q05048 431 aaKnown RBP3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 RGS1Q08116 209 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 ZNF154Q13106 437 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 SNTB2Q13425 540 aaKnown RBP3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 ASAH1Q13510 395 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 DPYSL3Q14195 570 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 CCDC57Q2TAC2 916 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 USH1GQ495M9 461 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 CELF3Q5SZQ8 465 aaKnown RBP3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 FAM120AOSQ5T036 256 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 MARC1Q5VT66 337 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 SLC22A10Q63ZE4 541 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 OR8G2PQ6IF36 304 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 CGB2Q6NT52 195 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 VITQ6UXI7 678 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 Q6ZR54 194 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 HPS6Q86YV9 775 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 ZDHHC21Q8IVQ6 265 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 C9orf40Q8IXQ3 194 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 KLHL30-AS1Q8NEE0 82 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 OR2T34Q8NGX1 318 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 CCDC26Q8TAB7 109 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 TMEM80Q96HE8 168 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 VPS39Q96JC1 886 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 DPH7Q9BTV6 452 aa3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 ZNF107Q9UII5 783 aaPredicted RBP3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 SAMD4AQ9UPU9 718 aaKnown RBP3.29□□□□□ -1.88
EFCAB11-213ENST00000557685 A0A1W2PQ72 361 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 OR6C65A6NJZ3 312 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 A8MUI8 341 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 PPIAL4DF5H284 164 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 CPLX1O14810 134 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 STX7O15400 261 aaKnown RBP3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 OR1F1O43749 312 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 NUDT21O43809 227 aaKnown RBP3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 TBX19O60806 448 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 TSC22D2O75157 780 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 NT5EP21589 574 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 FASP25445 335 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 NF2P35240 595 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 RPL8P62917 257 aaKnown RBP3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 CXCL6P80162 114 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 CNTN2Q02246 1040 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 CD47Q08722 323 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 PEX6Q13608 980 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 SERTAD2Q14140 314 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 TGIF1Q15583 401 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 CHI3L2Q15782 390 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 MAPK6Q16659 721 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 TMEM52BQ4KMG9 183 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 PAN3Q58A45 887 aaKnown RBP3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 RABGAP1LQ5R372 815 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 UTF1Q5T230 341 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 GALNT17Q6IS24 598 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 BLOC1S2Q6QNY1 142 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 CES3Q6UWW8 571 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 PAMR1Q6UXH9 720 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 DPY19L4Q7Z388 723 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 SERPINA9Q86WD7 417 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 TMEM17Q86X19 198 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 MCOLN2Q8IZK6 566 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 SPEM1Q8N4L4 309 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 OR9A4Q8NGU2 314 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 CNIH3Q8TBE1 160 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 SPRYD4Q8WW59 207 aaPredicted RBP3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 SIGLEC12Q96PQ1 595 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 GLT8D2Q9H1C3 349 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 PNO1Q9NRX1 252 aaKnown RBP3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 CHRNA9Q9UGM1 479 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 SLC2A6Q9UGQ3 507 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 ANAPC7Q9UJX3 599 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 FRMPD3Q5JV73 1810 aa3.28□□□□□ -1.88
EFCAB11-213ENST00000557685 ANKRD30BQ9BXX2 1392 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 KIF16BQ96L93 1317 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 FRG2CA6NGY1 282 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 SAGE2PA6NJ88 616 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 SRSF10O75494 262 aaKnown RBP3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 CD55P08174 381 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 TPSB2P20231 275 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 ATP6V1C1P21283 382 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 HNRNPA2B1P22626 353 aaKnown RBP3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 GDF1P27539 372 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 PSMA5P28066 241 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 OTX2P32243 289 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 CHI3L1P36222 383 aaPredicted RBP3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 MDH2P40926 338 aaKnown RBP3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 VLDLRP98155 873 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 RIPPLY1Q0D2K3 151 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 SELPLGQ14242 412 aa3.27□□□□□ -1.89
EFCAB11-213ENST00000557685 TPSAB1Q15661 275 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms