RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 GANABQ14697 944 aaKnown RBP12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 LARS2Q15031 903 aaKnown RBP12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 ADRM1Q16186 407 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 SYPL1Q16563 259 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 VMACQ2NL98 169 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 CCNJQ5T5M9 372 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 TIGD3Q6B0B8 471 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 PATL1Q86TB9 770 aaKnown RBP12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC15A3Q8IY34 581 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 Q8NA96 180 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 OR4C3Q8NH37 302 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 OR10A6Q8NH74 314 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 OTUB1Q96FW1 271 aaPredicted RBP12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 TMEM19Q96HH6 336 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 PTGES2Q9H7Z7 377 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 PROK2Q9HC23 129 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 KLHL1Q9NR64 748 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF232Q9UNY5 417 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 SHANK1Q9Y566 2161 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 POLEQ07864 2286 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 PRAMEF27A3QJZ7 478 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 EIF4E1BA6NMX2 242 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 B2RBV5 119 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 EIF4E2O60573 245 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 FCMRO60667 390 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 UGT2B17O75795 530 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 CBR3O75828 277 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 GLSO94925 669 aaPredicted RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 PGM3O95394 542 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 CBX6O95503 412 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 ANGPTL1O95841 491 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 IFNA14P01570 189 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 CHRM4P08173 479 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF24P17028 368 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 PTGDSP41222 190 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 GZMMP51124 257 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC7A2P52569 658 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 CASP9P55211 416 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 CHRNEQ04844 493 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 FOXO1Q12778 655 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 ELOAQ14241 798 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 FGFBP1Q14512 234 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 GPR68Q15743 365 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 LIN52Q52LA3 116 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 KRTCAP3Q53RY4 240 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 RABL3Q5HYI8 236 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 SAMD4BQ5PRF9 694 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 PRAMEF20Q5VT98 475 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 RNF220Q5VTB9 566 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 C6orf89Q6UWU4 347 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 CCDC80Q76M96 950 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 EIF3MQ7L2H7 374 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 PLCZ1Q86YW0 608 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF440Q8IYI8 595 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 ANKFN1Q8N957 763 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 OR2T12Q8NG77 320 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 OR1J4Q8NGS1 313 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 POP5Q969H6 163 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF583Q96ND8 569 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 BARD1Q99728 777 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC39A3Q9BRY0 314 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 MFRPQ9BY79 579 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 ALG2Q9H553 416 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 EXOSC3Q9NQT5 275 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 DEPPQ9NTK1 212 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 PPP4R1LQ9P1A2 415 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 TMEM181Q9P2C4 612 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 MKLN1Q9UL63 735 aa12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 PRPF19Q9UMS4 504 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-208ENST00000557652 NBASA2RRP1 2371 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 ELOVL7A1L3X0 281 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 SERINC4A6NH21 518 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 HSD17B1P14061 328 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 NID1P14543 1247 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 IL7RP16871 459 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 PCBP3P57721 371 aaKnown RBP12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 NFATC3Q12968 1075 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 SELPLGQ14242 412 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 MAPK11Q15759 364 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 GLYR1Q49A26 553 aaPredicted RBP12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 DNAL1Q4LDG9 190 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 EIPR1Q53HC9 387 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 FNDC7Q5VTL7 733 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 ZAR1Q86SH2 424 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 PTOV1Q86YD1 416 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 GRAMD2AQ8IUY3 354 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 ZZZ3Q8IYH5 903 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 FAM109AQ8N4B1 249 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 WDR60Q8WVS4 1066 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 FAR1Q8WVX9 515 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 HES7Q9BYE0 225 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 TTTY12Q9BZ98 90 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 ACKR4Q9NPB9 350 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 FBXO34Q9NWN3 711 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 CMTM6Q9NX76 183 aa12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 TUBA8Q9NY65 449 aaPredicted RBP12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 GPC6Q9Y625 555 aaPredicted RBP12.89□□□□□ -0.35
SUPT16H-208ENST00000557652 NCKAP5O14513 1909 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms