RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ERLIN2O94905 339 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 POP4O95707 220 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 PGK1P00558 417 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 APRTP07741 180 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 GHRP10912 638 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 IDO1P14902 403 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 MAT2AP31153 395 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 CHRNA3P32297 505 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 ETV5P41161 510 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 NDST1P52848 882 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 SLC26A5P58743 744 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 MRPL28Q13084 256 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 BTG3Q14201 252 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 CEBPEQ15744 281 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 INAQ16352 499 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 POM121L1PQ3SYA9 428 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 TCHHL1Q5QJ38 904 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 LDLRAP1Q5SW96 308 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 WDR25Q64LD2 544 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 THOC7Q6I9Y2 204 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 RBM43Q6ZSC3 357 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 ASRGL1Q7L266 308 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 NUFIP2Q7Z417 695 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 NANOGNBQ7Z5D8 188 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 RNF130Q86XS8 419 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 CCDC71Q8IV32 467 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF781Q8N8C0 355 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 COLGALT1Q8NBJ5 622 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 OR8K1Q8NGG5 319 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 OR56B1Q8NGI3 324 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 DQX1Q8TE96 717 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF75CPQ92670 426 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF597Q96LX8 424 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 TRIM51Q9BSJ1 452 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 OCR1Q9BZK8 76 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 ACTR3BQ9P1U1 418 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 EIF3KQ9UBQ5 218 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 CTSZQ9UBR2 303 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 LHX3Q9UBR4 397 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 MIOXQ9UGB7 285 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 PAIP2BQ9ULR5 123 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 KLF2Q9Y5W3 355 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 GMEB1Q9Y692 573 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 PHIPQ8WWQ0 1821 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 RFX7Q2KHR2 1363 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 MYH2Q9UKX2 1941 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 UBE4BO95155 1302 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 LTBP2Q14767 1821 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 FRMPD3Q5JV73 1810 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 A0A0J9YWU9 116 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 H0YC42 278 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 CPLX1O14810 134 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 LSM1O15116 133 aaKnown RBP3.75□□□□□ -1.81
PRPF39-212ENST00000557477 ARPC1BO15143 372 aaKnown RBP3.75□□□□□ -1.81
PRPF39-212ENST00000557477 SSX5O60225 188 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 CIAO1O76071 339 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 SORBS2O94875 1100 aaKnown RBP3.75□□□□□ -1.81
PRPF39-212ENST00000557477 IGHG1P01857 330 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 UQCRFS1P1P0C7P4 283 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 RNF224P0DH78 156 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 TROVE2P10155 538 aaKnown RBP eCLIP3.75□□□□□ -1.81
PRPF39-212ENST00000557477 CYBAP13498 195 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 FUT1P19526 365 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 TMOD1P28289 359 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 CAPGP40121 348 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 GMFBP60983 142 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 TIMM10P62072 90 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 CDKL1Q00532 357 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 MYBPC1Q00872 1141 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 PPIDQ08752 370 aaKnown RBP3.75□□□□□ -1.81
PRPF39-212ENST00000557477 FUT7Q11130 342 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 ELAVL2Q12926 359 aaKnown RBP3.75□□□□□ -1.81
PRPF39-212ENST00000557477 ENPP2Q13822 863 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 SHROOM1Q2M3G4 852 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-212ENST00000557477 HKDC1Q2TB90 917 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 DDI2Q5TDH0 399 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 RHBDD2Q6NTF9 364 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 FAM159AQ6UWV7 190 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 AMZ2Q86W34 360 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 Q8N377 158 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 RNF148Q8N7C7 305 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 OR1B1Q8NGR6 318 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 CCDC110Q8TBZ0 833 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 FBXO25Q8TCJ0 367 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 NPRL2Q8WTW4 380 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 TMEM37Q8WXS4 190 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 PPP1R14BQ96C90 147 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 C8orf76Q96K31 380 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 GLT1D1Q96MS3 346 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 ANKRD27Q96NW4 1050 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 KCNK16Q96T55 309 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 PARD6BQ9BYG5 372 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 TMEM231Q9H6L2 316 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 DCTPP1Q9H773 170 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 NGBQ9NPG2 151 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 TAS2R16Q9NYV7 291 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 IL20Q9NYY1 176 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 TUBGCP4Q9UGJ1 667 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 IKZF3Q9UKT9 509 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms