RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PGM2Q96G03 612 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 ZNF845Q96IR2 970 aaPredicted RBP12.76□□□□□ -0.37
SNX6-210ENST00000557341 FAM111AQ96PZ2 611 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 MECRQ9BV79 373 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 BAIAP2L1Q9UHR4 511 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 A0A087WZY1 265 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 UQCRHLA0A096LP55 91 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 SCAMP2O15127 329 aaKnown RBP12.75□□□□□ -0.37
SNX6-210ENST00000557341 FGF4P08620 206 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 ALOX5P09917 674 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 NUDT17P0C025 328 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 BCKDHAP12694 445 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 POU2F1P14859 743 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 HPGDP15428 266 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 LCN1P31025 176 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 CD79BP40259 229 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 KIR2DL2P43627 348 aaPredicted RBP12.75□□□□□ -0.37
SNX6-210ENST00000557341 PRIM2P49643 509 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 FAM27E3Q08E93 113 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 FOXD4Q12950 439 aaPredicted RBP12.75□□□□□ -0.37
SNX6-210ENST00000557341 MLC1Q15049 377 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 SGCBQ16585 318 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 DUSP5Q16690 384 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 TMEM44Q2T9K0 475 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 ARL13AQ5H913 290 aaPredicted RBP12.75□□□□□ -0.37
SNX6-210ENST00000557341 ZCCHC12Q6PEW1 402 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 FIGNL1Q6PIW4 674 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 LRIG3Q6UXM1 1119 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 BTLAQ7Z6A9 289 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 GGNQ86UU5 652 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 SLC16A11Q8NCK7 471 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 AGR3Q8TD06 166 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 PPP3R2Q96LZ3 170 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 OPN3Q9H1Y3 402 aaPredicted RBP12.75□□□□□ -0.37
SNX6-210ENST00000557341 ZCCHC3Q9NUD5 404 aaKnown RBP12.75□□□□□ -0.37
SNX6-210ENST00000557341 ZNF226Q9NYT6 803 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 TRAF6Q9Y4K3 522 aa12.75□□□□□ -0.37
SNX6-210ENST00000557341 A0A1W2PPR1 153 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 SHISA8B8ZZ34 492 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 SCDO00767 359 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 EIF1AYO14602 144 aaKnown RBP12.74□□□□□ -0.37
SNX6-210ENST00000557341 DIAPH2O60879 1101 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 KCNK2O95069 426 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 HSPA4LO95757 839 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 CD8BP10966 210 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 EFNA1P20827 205 aaPredicted RBP12.74□□□□□ -0.37
SNX6-210ENST00000557341 TBXA2RP21731 343 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 CCKARP32238 428 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 EIF1AXP47813 144 aaKnown RBP12.74□□□□□ -0.37
SNX6-210ENST00000557341 KCNJ5P48544 419 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 SERPINB4P48594 390 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 ZNF41P51814 821 aaPredicted RBP12.74□□□□□ -0.37
SNX6-210ENST00000557341 IFFO1Q0D2I5 559 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 ATP6AP1LQ52LC2 224 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 XKR7Q5GH72 579 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 PPP4R4Q6NUP7 873 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 ZNF474Q6S9Z5 364 aaPredicted RBP12.74□□□□□ -0.37
SNX6-210ENST00000557341 ZCCHC23Q6ZST2 131 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 MISPQ8IVT2 679 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 GATSQ8NAP1 163 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 OR4C3Q8NH37 302 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 FAM110BQ8TC76 370 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 ZBTB8AQ96BR9 441 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 FAM120BQ96EK7 910 aaKnown RBP12.74□□□□□ -0.37
SNX6-210ENST00000557341 OTUB1Q96FW1 271 aaPredicted RBP12.74□□□□□ -0.37
SNX6-210ENST00000557341 SLC39A3Q9BRY0 314 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 MED18Q9BUE0 208 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 ANKZF1Q9H8Y5 726 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 UBQLN4Q9NRR5 601 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 PAQR5Q9NXK6 330 aaPredicted RBP12.74□□□□□ -0.37
SNX6-210ENST00000557341 KLHL28Q9NXS3 571 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 ELOVL5Q9NYP7 299 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 SLC17A7Q9P2U7 560 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 LGALS13Q9UHV8 139 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 ATP6V1HQ9UI12 483 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 PROCRQ9UNN8 238 aa12.74□□□□□ -0.37
SNX6-210ENST00000557341 A0A1W2PQD3 144 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 C7orf72A4D263 438 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 CTIFO43310 598 aaKnown RBP12.73□□□□□ -0.37
SNX6-210ENST00000557341 SPAG7O75391 227 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 UGT2B10P36537 528 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 SERPINB5P36952 375 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 ADAM8P78325 824 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 POU6F2P78424 691 aaPredicted RBP12.73□□□□□ -0.37
SNX6-210ENST00000557341 LASP1Q14847 261 aaKnown RBP12.73□□□□□ -0.37
SNX6-210ENST00000557341 GUSBP1Q15486 140 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 PLPPR5Q32ZL2 321 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 UGT3A2Q3SY77 523 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 FAM214BQ7L5A3 538 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 ZAR1Q86SH2 424 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 WDR75Q8IWA0 830 aaKnown RBP12.73□□□□□ -0.37
SNX6-210ENST00000557341 GTPBP8Q8N3Z3 284 aaPredicted RBP12.73□□□□□ -0.37
SNX6-210ENST00000557341 TCP10LQ8TDR4 215 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 ACTRT2Q8TDY3 377 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 CHMP6Q96FZ7 201 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 STACQ99469 402 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 PRRG4Q9BZD6 226 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 DUSP22Q9NRW4 184 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 SIRT3Q9NTG7 399 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms