RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	RNF26	Q9BY78	433 aa	Predicted RBP	4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DNTTIP1	Q9H147	329 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FBXO44	Q9H4M3	255 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	AUNIP	Q9H7T9	357 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TLE6	Q9H808	572 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DDX31	Q9H8H2	851 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CCNB1IP1	Q9NPC3	277 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TUBG2	Q9NRH3	451 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ABCB10	Q9NRK6	738 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PNO1	Q9NRX1	252 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	BABAM1	Q9NWV8	329 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MS4A12	Q9NXJ0	267 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GTSE1	Q9NYZ3	720 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	VAPA	Q9P0L0	249 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MIOX	Q9UGB7	285 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NDRG3	Q9UGV2	375 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	UTS2R	Q9UKP6	389 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FBXO4	Q9UKT5	387 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GOLT1B	Q9Y3E0	138 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CEPT1	Q9Y6K0	416 aa		4.89	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	AGL	P35573	1532 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	KIF20B	Q96Q89	1820 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SPATA31A1	Q5TZJ5	1347 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	KNDC1	Q76NI1	1749 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839		A0A0A0MQY5	61 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839		A0A0G2JMP0	313 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TCRBV7S3A2	A0A539	114 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SERINC4	A6NH21	518 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MAGEB17	A8MXT2	336 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HACD1	B0YJ81	288 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839		F8WDY8	70 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839		I3L4J1	428 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HBP1	O60381	514 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DFNA5	O60443	496 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HCN1	O60741	890 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	B4GALT2	O60909	372 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	BANF1	O75531	89 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	STX11	O75558	287 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GH2	P01242	217 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PCCA	P05165	728 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MELTF	P08582	738 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FCGR2A	P12318	317 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC2A4	P14672	509 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DRD5	P21918	477 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HOXA13	P31271	388 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OTX2	P32243	289 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CA5A	P35218	305 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	UGT1A3	P35503	534 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	AHR	P35869	848 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MAP3K8	P41279	467 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	KHK	P50053	298 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SERPINH1	P50454	418 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	COPZ1	P61923	177 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	YWHAG	P61981	247 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SP3	Q02447	781 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TNFRSF9	Q07011	255 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CKAP4	Q07065	602 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GRIK2	Q13002	908 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SNTB2	Q13425	540 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NAE1	Q13564	534 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ALCAM	Q13740	583 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RUNX2	Q13950	521 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RCAN2	Q14206	197 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SNAPC1	Q16533	368 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ZBED5	Q49AG3	693 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TAF1B	Q53T94	588 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	C9orf152	Q5JTZ5	239 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	KIAA1755	Q5JYT7	1200 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC35D3	Q5M8T2	416 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DCST1	Q5T197	706 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	UBE2U	Q5VVX9	321 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MEDAG	Q5VYS4	303 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RNLS	Q5VYX0	342 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CARD17	Q5XLA6	110 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TYW3	Q6IPR3	259 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	AADACL2	Q6P093	401 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC27A4	Q6P1M0	643 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CD300LG	Q6UXG3	332 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ADGRD2	Q7Z7M1	963 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	YRDC	Q86U90	279 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TMPRSS12	Q86WS5	348 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FAM58A	Q8N1B3	248 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SVOPL	Q8N434	492 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TMEM217	Q8N7C4	229 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CCDC54	Q8NEL0	328 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OR1M1	Q8NGA1	313 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OR8J1	Q8NGP2	316 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	P2RX5	Q93086	422 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TOP1MT	Q969P6	601 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RRNAD1	Q96FB5	475 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NSL1	Q96IY1	281 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PRRC1	Q96M27	445 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DGAT2	Q96PD7	388 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SEPT5	Q99719	369 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ECSIT	Q9BQ95	431 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CADM1	Q9BY67	442 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CDT1	Q9H211	546 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ESRP2	Q9H6T0	727 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MAGEF1	Q9HAY2	307 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms