RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TCEA1P23193 301 aaKnown RBP15.93■□□□□ 0.14
SHMT2-225ENST00000556798 ATP12AP54707 1039 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 MTPNP58546 118 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 CHRNEQ04844 493 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 FADDQ13158 208 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 CYLC2Q14093 348 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-225ENST00000556798 SELPLGQ14242 412 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 SLC10A1Q14973 349 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 MAPK11Q15759 364 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 CD226Q15762 336 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 EIF2S3LQ2VIR3 472 aaKnown RBP15.93■□□□□ 0.14
SHMT2-225ENST00000556798 TRMT5Q32P41 509 aaKnown RBP15.93■□□□□ 0.14
SHMT2-225ENST00000556798 RUNDC3AQ59EK9 446 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 PDZK1Q5T2W1 519 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 BNC2Q6ZN30 1099 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-225ENST00000556798 FGD2Q7Z6J4 655 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 GHDCQ8N2G8 530 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 OR4K17Q8NGC6 315 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 DUSP19Q8WTR2 217 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 CGREF1Q99674 301 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 QRSL1Q9H0R6 528 aaKnown RBP15.93■□□□□ 0.14
SHMT2-225ENST00000556798 DSN1Q9H410 356 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 RUBCNLQ9H714 662 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 SDHAF3Q9NRP4 125 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 P2RX2Q9UBL9 471 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 ARL2BPQ9Y2Y0 163 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 POLEQ07864 2286 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 UBR5O95071 2799 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 HELZ2Q9BYK8 2649 aaKnown RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 BBIP1A8MTZ0 92 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 UGT2B17O75795 530 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 FAM107AO95990 144 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 BCHEP06276 602 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 PPIBP23284 216 aaKnown RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 MAGEA8P43361 318 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 NDUFAF6Q330K2 333 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 KLHL26Q53HC5 615 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 EIPR1Q53HC9 387 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 COQ5Q5HYK3 327 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 RPS26P11Q5JNZ5 115 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 TRILQ7L0X0 811 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 YRDCQ86U90 279 aaKnown RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 CHERPQ8IWX8 916 aaKnown RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 ZNF619Q8N2I2 560 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 FADS6Q8N9I5 356 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 ZNF527Q8NB42 609 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 OR2M3Q8NG83 312 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 PHOSPHO1Q8TCT1 267 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 MAL2Q969L2 176 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 RCN3Q96D15 328 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 SH3YL1Q96HL8 342 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 ANKRD27Q96NW4 1050 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 TRNT1Q96Q11 434 aaKnown RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 HOXD1Q9GZZ0 328 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 SLC38A1Q9H2H9 487 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 LDAHQ9H6V9 325 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 EXO5Q9H790 373 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 PLSCR2Q9NRY7 297 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 QPCTLQ9NXS2 382 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 TNFRSF10DQ9UBN6 386 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 LIPT1Q9Y234 373 aa15.92■□□□□ 0.14
SHMT2-225ENST00000556798 GCN1Q92616 2671 aaKnown RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 FASNP49327 2511 aaKnown RBP15.92■□□□□ 0.14
SHMT2-225ENST00000556798 TRGV5A0A0B4J1U4 118 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 A0A1W2PQD3 144 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 EVPLLA8MZ36 301 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 FXYD1O00168 92 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 OIP5O43482 229 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 CBR3O75828 277 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 WISP1O95388 367 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 IGHG3P01860 377 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 HPNP05981 417 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 TFPTP0C1Z6 253 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 COX4I1P13073 169 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 ENDOUP21128 410 aaKnown RBP15.91■□□□□ 0.14
SHMT2-225ENST00000556798 C17orf67Q0P5P2 114 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 MAPK14Q16539 360 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 WIPI1Q5MNZ9 446 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-225ENST00000556798 GCNT6Q5T4J0 391 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 LRRC74BQ6ZQY2 392 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 FAM83FQ8NEG4 500 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-225ENST00000556798 RP9Q8TA86 221 aaKnown RBP15.91■□□□□ 0.14
SHMT2-225ENST00000556798 PRR7Q8TB68 274 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 SLC38A5Q8WUX1 472 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 ZG16BQ96DA0 208 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 TMEM19Q96HH6 336 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 SAP130Q9H0E3 1048 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 POLE3Q9NRF9 147 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 DKKL1Q9UK85 242 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 OSGIN2Q9Y236 505 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 DTNAQ9Y4J8 743 aa15.91■□□□□ 0.14
SHMT2-225ENST00000556798 TENM4Q6N022 2769 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 BMP2P12643 396 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 ABOP16442 354 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 ZNF117Q03924 483 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 RBPJQ06330 500 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 ZNF141Q15928 474 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 GKAP1Q5VSY0 366 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-225ENST00000556798 ARHGAP11AQ6P4F7 1023 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 OR14L1PQ8NHC6 308 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms