RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 BMP4P12644 408 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 BCKDHAP12694 445 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 SDC1P18827 310 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 PRPS1L1P21108 318 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 CTSSP25774 331 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 CEACAM8P31997 349 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-222ENST00000556768 ASCL1P50553 236 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 STX5Q13190 355 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 TP53BP2Q13625 1128 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 BCL2A1Q16548 175 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 SPDYE7PQ495Y7 208 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 RAET1LQ5VY80 246 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 FAM219BQ5XKK7 198 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 OR2A2Q6IF42 318 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 ANKRD26P1Q6NSI1 321 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 NPSR1Q6W5P4 371 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 ZCCHC23Q6ZST2 131 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF551Q7Z340 670 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-222ENST00000556768 P4HA3Q7Z4N8 544 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 GRAMD2AQ8IUY3 354 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 MREGQ8N565 214 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 CCDC168Q8NDH2 2452 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 NUP43Q8NFH3 380 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 TNIP2Q8NFZ5 429 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 CLHC1Q8NHS4 586 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 DUSP19Q8WTR2 217 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 JADE3Q92613 823 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 TUBGCP3Q96CW5 907 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 MS4A4EQ96PG1 132 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 PIGQQ9BRB3 760 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 PARD6BQ9BYG5 372 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 OR2B2Q9GZK3 357 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 TNFRSF12AQ9NP84 129 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 KCNK9Q9NPC2 374 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.65□□□□□ -1.34
SCFD1-222ENST00000556768 FBXL2Q9UKC9 423 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 ITGB1BP2Q9UKP3 347 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 RPH3AQ9Y2J0 694 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-222ENST00000556768 PTGDR2Q9Y5Y4 395 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 V9GYY5 206 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-222ENST00000556768 POLQO75417 2590 aa6.65□□□□□ -1.35
SCFD1-222ENST00000556768 UQCRHLA0A096LP55 91 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 A0A1W2PRB8 838 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MBD3L4A6NDZ8 208 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MBD3L3A6NE82 208 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TUBAL3A6NHL2 446 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MBD3L5A6NJ08 208 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 SCDO00767 359 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 BIRC5O15392 142 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 CFLARO15519 480 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 IL18BPO95998 194 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 KRT16P08779 473 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ALOX5P09917 674 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TMIGD3P0DMS9 266 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 PEPDP12955 493 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 IGFBP2P18065 325 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ATP6V1C1P21283 382 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 LCN1P31025 176 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 PTGDSP41222 190 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 CPA2P48052 419 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 PRIM2P49643 509 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 DIO3P55073 304 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 RPS3AP61247 264 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MLC1Q15049 377 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 LHFPL2Q6ZUX7 228 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 LIX1LQ8IVB5 337 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 COX18Q8N8Q8 333 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF527Q8NB42 609 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ACBD4Q8NC06 268 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 VPS37AQ8NEZ2 397 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 OR6Y1Q8NGX8 325 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 OR2T11Q8NH01 316 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MBD3L2Q8NHZ7 208 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 RNASE6Q93091 150 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 CIDECQ96AQ7 238 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 RMND5BQ96G75 393 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TREX2Q9BQ50 279 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 LMF2Q9BU23 707 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 SFXN3Q9BWM7 321 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 DSN1Q9H410 356 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TUBB1Q9H4B7 451 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 PCDHGB4Q9UN71 923 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 FAF1Q9UNN5 650 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 HIF3AQ9Y2N7 669 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 GTF3C1Q12789 2109 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF407Q9C0G0 2248 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 WDR91A4D1P6 747 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TMEM233B4DJY2 109 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 H3BNH8 94 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 SCAMP2O15127 329 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TYROBPO43914 113 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 FADS1O60427 444 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 SKAP2O75563 359 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 RGS9O75916 674 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 UBOX5O94941 541 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 RCBTB2O95199 551 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 UTS2O95399 124 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 PSMG1O95456 288 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ANGPTL1O95841 491 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TP53P04637 393 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms