RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TSPAN8P19075 237 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ADH6P28332 368 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 GSTM5P46439 218 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 RAC1P63000 192 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 RAE1P78406 368 aaKnown RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ACSM2AQ08AH3 577 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ZNHIT3Q15649 155 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ZNF672Q499Z4 452 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 SPIN4Q56A73 249 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 PDSS1Q5T2R2 415 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ACSM2BQ68CK6 577 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 MFSD12Q6NUT3 480 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ESPNLQ6ZVH7 1005 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 GALNT10Q86SR1 603 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 GTPBP8Q8N3Z3 284 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 EIF1ADQ8N9N8 165 aaKnown RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 OR2V1Q8NHB1 315 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 C11orf24Q96F05 449 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 HS6ST2Q96MM7 605 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 USB1Q9BQ65 265 aaKnown RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 MRPL57Q9BQC6 102 aaKnown RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 C1QTNF3Q9BXJ4 246 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 FUT8Q9BYC5 575 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 GRIP2Q9C0E4 1043 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 C12orf49Q9H741 205 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 C3orf14Q9HBI5 128 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 CDC42EP3Q9UKI2 254 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 VDAC3Q9Y277 283 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 PCNX3Q9H6A9 2034 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 TTC36A6NLP5 189 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 UPK1AO00322 258 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 GMFGO60234 142 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 ZNF500O60304 480 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-221ENST00000556571 GCM2O75603 506 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-221ENST00000556571 PSMG1O95456 288 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 JUNP05412 331 aaKnown RBP10.59□□□□□ -0.71
ACTN1-221ENST00000556571 ABHD2P08910 425 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 CHN1P15882 459 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 DDCP20711 480 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 IL32P24001 234 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 AGTR1P30556 359 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 HSD17B3P37058 310 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 MAGEA12P43365 314 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 RFX3P48380 749 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 NCBP2P52298 156 aaKnown RBP eCLIP10.59□□□□□ -0.71
ACTN1-221ENST00000556571 FAPQ12884 760 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 RASA2Q15283 850 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 TAB1Q15750 504 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 TCHHL1Q5QJ38 904 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-221ENST00000556571 CPTPQ5TA50 214 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 GALNT18Q6P9A2 607 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 FIGNL1Q6PIW4 674 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 APOOLQ6UXV4 268 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 CNPY4Q8N129 248 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 GABRG1Q8N1C3 465 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 OR2L13Q8N349 312 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 CDYL2Q8N8U2 506 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 OSTF1Q92882 214 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 NEUROG1Q92886 237 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 ZBTB8AQ96BR9 441 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 RHNO1Q9BSD3 238 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 LMF2Q9BU23 707 aaKnown RBP10.59□□□□□ -0.71
ACTN1-221ENST00000556571 ACPTQ9BZG2 426 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 MRPL46Q9H2W6 279 aaKnown RBP10.59□□□□□ -0.71
ACTN1-221ENST00000556571 ALG2Q9H553 416 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 DDX18Q9NVP1 670 aaKnown RBP10.59□□□□□ -0.71
ACTN1-221ENST00000556571 FBXO34Q9NWN3 711 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 ZNF180Q9UJW8 692 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 GRID1Q9ULK0 1009 aa10.59□□□□□ -0.71
ACTN1-221ENST00000556571 CR1P17927 2039 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 A0A0J9YW62 118 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 C7orf72A4D263 438 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 ESPNB1AK53 854 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 TNFSF11O14788 317 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 RIPK2O43353 540 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 NDUFS7O75251 213 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 KCNH1O95259 989 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 OPN1LWP04000 364 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 ANXA4P09525 319 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-221ENST00000556571 ME2P23368 584 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 TIA1P31483 386 aaKnown RBP eCLIP10.58□□□□□ -0.72
ACTN1-221ENST00000556571 GABRA3P34903 492 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 CARD18P57730 90 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 CLCQ05315 142 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 C2orf80Q0P641 193 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 P2RY6Q15077 328 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 NRF1Q16656 503 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 PGGHGQ32M88 737 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 GRAMD1BQ3KR37 738 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 TMEM201Q5SNT2 666 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 SFRP5Q5T4F7 317 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 C6orf52Q5T4I8 152 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 UBAP2Q5T6F2 1119 aaKnown RBP10.58□□□□□ -0.72
ACTN1-221ENST00000556571 HBMQ6B0K9 141 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 TMEM107Q6UX40 140 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 PIWIL2Q8TC59 973 aaKnown RBP10.58□□□□□ -0.72
ACTN1-221ENST00000556571 METTL6Q8TCB7 284 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 ACTRT2Q8TDY3 377 aa10.58□□□□□ -0.72
ACTN1-221ENST00000556571 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.58□□□□□ -0.724e-7■■■■■ 58.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms