RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SELENONQ9NZV5 590 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 CNIH4Q9P003 139 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 C6orf203Q9P0P8 240 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 V9GYQ6 96 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 ALG1L2C9J202 215 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 FAM47E-STBD1D6RA91 191 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 NPIPB9F8W1W9 429 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 TLX3O43711 291 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ICOSLGO75144 302 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 UGT2B11O75310 529 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 NADKO95544 446 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 OXSR1O95747 527 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 CST1P01037 141 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 LDLRP01130 860 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 IGKV1D-16P01601 117 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 P04436 131 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 UBL4AP11441 157 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 RHCEP18577 417 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 CD247P20963 164 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 MSX1P28360 303 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 EVI2BP34910 448 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 EIF2S3P41091 472 aaKnown RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 SLC6A8P48029 635 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ERFP50548 548 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 HLCSP50747 726 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 CCL11P51671 97 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 RGS8P57771 180 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 FBXW4P57775 412 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 EEF1A1P68104 462 aaKnown RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 OC90Q02509 493 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 C17orf67Q0P5P2 114 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 Q0VFX4 171 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 GK3PQ14409 553 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 FGFBP1Q14512 234 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 RCN1Q15293 331 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 DEFB109BQ30KR1 87 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 KLHL26Q53HC5 615 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 SLC22A10Q63ZE4 541 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 SLC30A6Q6NXT4 461 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ENPP6Q6UWR7 440 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ISLR2Q6UXK2 745 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 IL20RBQ6UXL0 311 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF836Q6ZNA1 936 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 RTL4Q6ZR62 310 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ERMP1Q7Z2K6 904 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 PIWIL3Q7Z3Z3 882 aaKnown RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 VTCN1Q7Z7D3 282 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 GALNT10Q86SR1 603 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 VRK2Q86Y07 508 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 GRAMD2AQ8IUY3 354 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 APLFQ8IW19 511 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 OR5M3Q8NGP4 307 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 OR4C3Q8NH37 302 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 PHOSPHO1Q8TCT1 267 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 TM9SF4Q92544 642 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ZG16BQ96DA0 208 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF559Q9BR84 538 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 UTP23Q9BRU9 249 aaKnown RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 TRIM2Q9C040 744 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 LAT2Q9GZY6 243 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 QRSL1Q9H0R6 528 aaKnown RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 VCX3BQ9H321 246 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 RNPEPL1Q9HAU8 725 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 TMEM27Q9HBJ8 222 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 TIMMDC1Q9NPL8 285 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 KLRF1Q9NZS2 232 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 STX18Q9P2W9 335 aaKnown RBP8.47□□□□□ -1.05
ACTN1-218ENST00000556343 ENPP4Q9Y6X5 453 aa8.47□□□□□ -1.05
ACTN1-218ENST00000556343 NPIPA5A0A0B4J1W7 369 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 CDHR4A6H8M9 788 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 TMEM8BA6NDV4 472 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 PRAMEF25A6NGN4 478 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 A6NL46 340 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 NPIPA7E9PJI5 369 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 H0Y3Z8 333 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 ADAMDEC1O15204 470 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 CLOCKO15516 846 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF264O43296 627 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 FADS1O60427 444 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 DPM1O60762 260 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 FMO6PO60774 539 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 CYP7B1O75881 506 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 KRT36O76013 467 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 OR6B1O95007 311 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 SNX4O95219 450 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 ZIC2O95409 532 aaPredicted RBP8.46□□□□□ -1.06
ACTN1-218ENST00000556343 ATP6V1G2O95670 118 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 NPIPA8P0DM63 369 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 ANPEPP15144 967 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 HOXD11P31277 338 aaPredicted RBP8.46□□□□□ -1.06
ACTN1-218ENST00000556343 SOX3P41225 446 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 MAGEA2P43356 314 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 SLC34A1Q06495 639 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 MAPK14Q16539 360 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF791Q3KP31 576 aaPredicted RBP8.46□□□□□ -1.06
ACTN1-218ENST00000556343 MRPL2Q5T653 305 aaKnown RBP8.46□□□□□ -1.06
ACTN1-218ENST00000556343 FCRLBQ6BAA4 426 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 TMEM81Q6P7N7 255 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 DEF8Q6ZN54 512 aa8.46□□□□□ -1.06
ACTN1-218ENST00000556343 C16orf47Q6ZP98 133 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms