RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CLK3P49761 638 aaKnown RBP11.91□□□□□ -0.5
TGFB3-204ENST00000556285 ACKR1Q16570 336 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 SGCBQ16585 318 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 DUSP5Q16690 384 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.91□□□□□ -0.5
TGFB3-204ENST00000556285 CTU2Q2VPK5 515 aaKnown RBP11.91□□□□□ -0.5
TGFB3-204ENST00000556285 GLYR1Q49A26 553 aaPredicted RBP11.91□□□□□ -0.5
TGFB3-204ENST00000556285 RFTN2Q52LD8 501 aaPredicted RBP11.91□□□□□ -0.5
TGFB3-204ENST00000556285 FAM214BQ7L5A3 538 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 P3H2Q8IVL5 708 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 SLC16A11Q8NCK7 471 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 PPP1R14CQ8TAE6 165 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 ADGRG7Q96K78 797 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 FCRL1Q96LA6 429 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 ZNF395Q9H8N7 513 aaPredicted RBP11.91□□□□□ -0.5
TGFB3-204ENST00000556285 LRTM1Q9HBL6 345 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 C1orf109Q9NX04 203 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 MRTO4Q9UKD2 239 aaKnown RBP11.91□□□□□ -0.5
TGFB3-204ENST00000556285 PROCRQ9UNN8 238 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 RTTNQ86VV8 2226 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 TLN2Q9Y4G6 2542 aa11.91□□□□□ -0.5
TGFB3-204ENST00000556285 FBN1P35555 2871 aaKnown RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 TRIM64A6NGJ6 449 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 TRIM64BA6NI03 449 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 TMEM233B4DJY2 109 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 ALG1L2C9J202 215 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 H7C1Q1 480 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 SLC28A1O00337 649 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 KLF4O43474 513 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 CXCL13O43927 109 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 IL11P20809 199 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 TBXA2RP21731 343 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 PRPH2P23942 346 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 PSMA4P25789 261 aaKnown RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 CRHR1P34998 444 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 FRKP42685 505 aaPredicted RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 RNF144AP50876 292 aaPredicted RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 PSMD4P55036 377 aaKnown RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 RPS3AP61247 264 aaKnown RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 CCDC153Q494R4 210 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 CCNJQ5T5M9 372 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 SZRD1Q7Z422 152 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 C10orf107Q8IVU9 208 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 C4orf33Q8N1A6 199 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 CEP112Q8N8E3 955 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 CCDC63Q8NA47 563 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 NUP43Q8NFH3 380 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 OR10D3Q8NH80 312 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 POC1BQ8TC44 478 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 FAM110BQ8TC76 370 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 EPS8L3Q8TE67 593 aaKnown RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 NUDT8Q8WV74 236 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 PPCDCQ96CD2 204 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 PERPQ96FX8 193 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 SH3YL1Q96HL8 342 aaPredicted RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 COX4I2Q96KJ9 171 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 Q96MF0 132 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 CCL19Q99731 98 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 PIP5K1AQ99755 562 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 GATA5Q9BWX5 397 aaPredicted RBP11.9□□□□□ -0.5
TGFB3-204ENST00000556285 REEP4Q9H6H4 257 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 TMEM185BQ9H7F4 350 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 C3orf14Q9HBI5 128 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 SH3BP4Q9P0V3 963 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 GIMAP2Q9UG22 337 aa11.9□□□□□ -0.5
TGFB3-204ENST00000556285 A0A0J9YW62 118 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 A0A1W2PRB8 838 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 H3BQF6 201 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 TNFSF11O14788 317 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 AZIN1O14977 448 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 SMAD7O15105 426 aaKnown RBP11.89□□□□□ -0.51
TGFB3-204ENST00000556285 ARHGEF9O43307 516 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 OIP5O43482 229 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 RGS14O43566 566 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 NDUFB5O43674 189 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 KCNK2O95069 426 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 PLAUP00749 431 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 IFI6P09912 130 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 SHC1P29353 583 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 MANFP55145 182 aaKnown RBP11.89□□□□□ -0.51
TGFB3-204ENST00000556285 RPL38P63173 70 aaKnown RBP11.89□□□□□ -0.51
TGFB3-204ENST00000556285 SLC18A2Q05940 514 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 PDE7AQ13946 482 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 PCLAFQ15004 111 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 CD226Q15762 336 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 PLPPR5Q32ZL2 321 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 LIPMQ5VYY2 423 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 MFSD12Q6NUT3 480 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 STAC2Q6ZMT1 411 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 YTHDF3Q7Z739 585 aaKnown RBP11.89□□□□□ -0.51
TGFB3-204ENST00000556285 LRRC75A-AS1Q8N1F1 130 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 CDRT4Q8N9R6 151 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 KIF18AQ8NI77 898 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 PIGTQ969N2 578 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 RNF145Q96MT1 663 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 CCT7Q99832 543 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 PRRG4Q9BZD6 226 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 SIRT3Q9NTG7 399 aaPredicted RBP11.89□□□□□ -0.51
TGFB3-204ENST00000556285 MED17Q9NVC6 651 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms