RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 DNASE1L1P49184 302 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 MEOX1P50221 254 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 GPR85P60893 370 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 SLC25A3Q00325 362 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 LIPEQ05469 1076 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 GABPB1Q06547 395 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 NFATC3Q12968 1075 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 VEZF1Q14119 521 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 SELPLGQ14242 412 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 VMACQ2NL98 169 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 DNAL1Q4LDG9 190 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 KLHL26Q53HC5 615 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 TIGD3Q6B0B8 471 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 TYW3Q6IPR3 259 aaKnown RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 C8orf82Q6P1X6 216 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 BNC2Q6ZN30 1099 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 FRRS1Q6ZNA5 592 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 CCDC121Q6ZUS5 278 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 EIF3MQ7L2H7 374 aaKnown RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 GALNT10Q86SR1 603 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 IFNEQ86WN2 208 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 ZGRF1Q86YA3 2104 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 CMIPQ8IY22 773 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 DEFB107AQ8IZN7 70 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 ZFP62Q8NB50 900 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 BHLHE22Q8NFJ8 381 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 OR2M7Q8NG81 312 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 OR4K17Q8NGC6 315 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 OR1J4Q8NGS1 313 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 OR52P1PQ8NH57 321 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 NFKBIDQ8NI38 313 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 PHOSPHO1Q8TCT1 267 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 SLC26A7Q8TE54 656 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 GRHL3Q8TE85 626 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 RASSF5Q8WWW0 418 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 MAL2Q969L2 176 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 TMEM19Q96HH6 336 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 TMEM41AQ96HV5 264 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 JSRP1Q96MG2 331 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 CDRT15Q96T59 188 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 KCTD14Q9BQ13 255 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 C1orf21Q9H246 121 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 SLC38A1Q9H2H9 487 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 ALG2Q9H553 416 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 PIF1Q9H611 641 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 PTGES2Q9H7Z7 377 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 ZFP64Q9NPA5 681 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 FBXO34Q9NWN3 711 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 CMTM6Q9NX76 183 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 ABCD2Q9UBJ2 740 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 PRPF19Q9UMS4 504 aaKnown RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 SLC35A3Q9Y2D2 325 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 CSAG2Q9Y5P2 127 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 WIF1Q9Y5W5 379 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 ZNF407Q9C0G0 2248 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 NPIPA5A0A0B4J1W7 369 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 PRAMEF27A3QJZ7 478 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 NPIPA7E9PJI5 369 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 NPIPB9F8W1W9 429 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 G3V3Y1 287 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 NME4O00746 187 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 GNB5O14775 395 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 TFECO14948 347 aaPredicted RBP6.98□□□□□ -1.29
TDP1-214ENST00000556063 ZNF264O43296 627 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 HCRTR2O43614 444 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 EIF4E2O60573 245 aaKnown RBP6.98□□□□□ -1.29
TDP1-214ENST00000556063 TRIM3O75382 744 aaPredicted RBP6.98□□□□□ -1.29
TDP1-214ENST00000556063 UGT2B17O75795 530 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 CBR3O75828 277 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 ANGPTL1O95841 491 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 CSTAP01040 98 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 C1QCP02747 245 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 THBS1P07996 1170 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 NPIPA8P0DM63 369 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 T-ENOLP0DO92 83 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 UBL4AP11441 157 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 NID1P14543 1247 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 UQCRBP14927 111 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 ZNF24P17028 368 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 ADH7P40394 386 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 GSK3BP49841 420 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 SUMO3P55854 103 aaPredicted RBP6.98□□□□□ -1.29
TDP1-214ENST00000556063 PPIAP62937 165 aaKnown RBP6.98□□□□□ -1.29
TDP1-214ENST00000556063 KCNJ10P78508 379 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 ALDH6A1Q02252 535 aaKnown RBP6.98□□□□□ -1.29
TDP1-214ENST00000556063 FUT5Q11128 374 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 BNIP1Q12981 228 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 ADRM1Q16186 407 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 LIN52Q52LA3 116 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 EIPR1Q53HC9 387 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 PDZK1Q5T2W1 519 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 DESI1Q6ICB0 168 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 PCSK4Q6UW60 755 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 ZAR1Q86SH2 424 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 MARCH3Q86UD3 253 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 CALHM3Q86XJ0 350 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 PTOV1Q86YD1 416 aa6.98□□□□□ -1.29
TDP1-214ENST00000556063 PLCZ1Q86YW0 608 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms