RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PDE7BQ9NP56 450 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 THSD1Q9NS62 852 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 EXD2Q9NVH0 621 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 IRAK4Q9NWZ3 460 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 SOHLH2Q9NX45 425 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 UBAP1Q9NZ09 502 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 CALML5Q9NZT1 146 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 KCMF1Q9P0J7 381 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 LRIT1Q9P2V4 623 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 C3orf18Q9UK00 162 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 CBLCQ9ULV8 474 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 CLCA2Q9UQC9 943 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 LIPT1Q9Y234 373 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 MRPS33Q9Y291 106 aaKnown RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 MYRFQ9Y2G1 1151 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 NAALAD2Q9Y3Q0 740 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PCDHGA9Q9Y5G4 932 aaKnown RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PCDHGA8Q9Y5G5 932 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PCDHGA6Q9Y5G7 932 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PCDHGA3Q9Y5H0 932 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 NSD1Q96L73 2696 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PRRC2CQ9Y520 2896 aaKnown RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 NINQ8N4C6 2090 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 A0A0G2JPF8 293 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 A0A1W2PNU3 283 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 HYKKA2RU49 373 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 WASHC1A8K0Z3 465 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 HNRNPCL2B2RXH8 293 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 HNRNPCL3B7ZW38 293 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 PLOD2O00469 737 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 HMGN4O00479 90 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 DLGAP1O14490 977 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 GNB5O14775 395 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ASNA1O43681 348 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 NUDT21O43809 227 aaKnown RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 DUX1O43812 170 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 PRAMEF10O60809 474 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ALX3O95076 343 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF205O95201 554 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 H6PDO95479 791 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ZBTB11O95625 1053 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 SNAP29O95721 258 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 C9P02748 559 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 OPN1SWP03999 348 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 IFNW1P05000 195 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 HMGN2P05204 90 aaKnown RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 IFI6P09912 130 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 HNRNPCL4P0DMR1 293 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ALPPL2P10696 532 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 CPMP14384 443 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ALDH4A1P30038 563 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 GPR3P46089 330 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 AVPR1BP47901 424 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 RPS6KA3P51812 740 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 CRISP3P54108 245 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 SMIM11AP58511 58 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 PPP1CAP62136 330 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ADARB1P78563 741 aaKnown RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 VLDLRP98155 873 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 LSAMPQ13449 338 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 IL18R1Q13478 541 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 PRTGQ2VWP7 1150 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ZIK1Q3SY52 487 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 TTC33Q6PID6 262 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 LYPD4Q6UWN0 246 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 TMEM107Q6UX40 140 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 CYP4Z1Q86W10 505 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 PLXDC1Q8IUK5 500 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 PHC2Q8IXK0 858 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 CA13Q8N1Q1 262 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 OR9A2Q8NGT5 310 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 SUN3Q8TAQ9 357 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ADAMTS15Q8TE58 950 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 RMND5BQ96G75 393 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 C10orf90Q96M02 699 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 TGM7Q96PF1 710 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF300Q96RE9 604 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ELF4Q99607 663 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 MAP3K3Q99759 626 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ACTRT3Q9BYD9 372 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 YTHDF1Q9BYJ9 559 aaKnown RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 MRPS26Q9BYN8 205 aaKnown RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ADNPQ9H2P0 1102 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 SMURF2Q9HAU4 748 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 CACYBPQ9HB71 228 aaKnown RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 BCL2L10Q9HD36 194 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 FAM60AQ9NP50 221 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ASCL3Q9NQ33 180 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 DDX18Q9NVP1 670 aaKnown RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 UCKL1Q9NWZ5 548 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 NDUFA13Q9P0J0 144 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 PDP1Q9P0J1 537 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 PTGFRNQ9P2B2 879 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 KIF17Q9P2E2 1029 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 SEC14L3Q9UDX4 400 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 FTSJ1Q9UET6 329 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ABCG2Q9UNQ0 655 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 SH3GLB1Q9Y371 365 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 MRPS2Q9Y399 296 aaKnown RBP6.34□□□□□ -1.39
SLIRP-204ENST00000555890 SAMHD1Q9Y3Z3 626 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms