RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 IGLL1P15814 213 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 TSPAN8P19075 237 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 CCNCP24863 283 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 HPDP32754 393 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-216ENST00000555550 COPB2P35606 906 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 HTR5AP47898 357 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 PFN3P60673 137 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 ARF5P84085 180 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 CFAP221Q4G0U5 840 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 IL23RQ5VWK5 629 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 OR8G2PQ6IF36 304 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 SLC39A4Q6P5W5 647 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 OLFM4Q6UX06 510 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 Q7L0L9 218 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 C20orf203Q8NBC4 194 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 OR2T33Q8NG76 320 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 KIR2DL5BQ8NHK3 375 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 ZNF721Q8TF20 911 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 C7orf33Q8WU49 177 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 SNX21Q969T3 373 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 MBOAT4Q96T53 435 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 FTHL17Q9BXU8 183 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 NFKBIZQ9BYH8 718 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 NMNAT2Q9BZQ4 307 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 SIRPDQ9H106 197 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 VCXQ9H320 206 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 UBQLN1Q9UMX0 589 aaKnown RBP2.27□□□□□ -2.05
SCFD1-216ENST00000555550 SAMD4AQ9UPU9 718 aaKnown RBP2.27□□□□□ -2.05
SCFD1-216ENST00000555550 SCML2Q9UQR0 700 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 WDR45Q9Y484 360 aa2.27□□□□□ -2.05
SCFD1-216ENST00000555550 ASTN1O14525 1302 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 A0A1W2PQ67 120 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 ZSCAN5BA6NJL1 495 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 H0YL77 283 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 ZBTB14O43829 449 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 ICOSLGO75144 302 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 TRIM3O75382 744 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-216ENST00000555550 ABHD2P08910 425 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 NUDT1P36639 197 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 STARP49675 285 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 LIM2P55344 173 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 GPNMBQ14956 572 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 SHHQ15465 462 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 SYPL1Q16563 259 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 ASPHD2Q6ICH7 369 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 SCYL2Q6P3W7 929 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 SERPINA9Q86WD7 417 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 SUMF2Q8NBJ7 301 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 OR9A4Q8NGU2 314 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 MYDGFQ969H8 173 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 SPATA13Q96N96 652 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 NXF3Q9H4D5 531 aaKnown RBP2.26□□□□□ -2.05
SCFD1-216ENST00000555550 PRMT8Q9NR22 394 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-216ENST00000555550 ARGLU1Q9NWB6 273 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-216ENST00000555550 HMG20BQ9P0W2 317 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 GALPQ9UBC7 116 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 PSG11Q9UQ72 335 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 MAB21L2Q9Y586 359 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 RLFQ13129 1914 aa2.26□□□□□ -2.05
SCFD1-216ENST00000555550 LTBP1Q14766 1721 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 IGHV1OR15-1A0A075B7D0 117 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 TRBV2A0A0J9YWF9 115 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 A6NDX4 124 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 ANKRD63C9JTQ0 380 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 FOXH1O75593 365 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 KLF8O95600 359 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-216ENST00000555550 CHRNA1P02708 482 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 IGHV4-34P06331 123 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 GSTT2P0CG29 244 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 GSTT2BP0CG30 244 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 BTDP43251 543 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 RPL8P62917 257 aaKnown RBP2.25□□□□□ -2.05
SCFD1-216ENST00000555550 KRT83P78385 493 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 C17orf67Q0P5P2 114 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 C16orf72Q14CZ0 275 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 ZSWIM7Q19AV6 140 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 TOR1AIP1Q5JTV8 583 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 STAC2Q6ZMT1 411 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 PAQR9Q6ZVX9 377 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 LRRC70Q7Z2Q7 622 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 VPS36Q86VN1 386 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 LCA5Q86VQ0 697 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 SKA3Q8IX90 412 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 ZNF561Q8N587 486 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 Q8N9W7 124 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 ZSCAN4Q8NAM6 433 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-216ENST00000555550 NEIL3Q8TAT5 605 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 BLOC1S5Q8TDH9 187 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 IL1F10Q8WWZ1 152 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 VMP1Q96GC9 406 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 COG4Q9H9E3 785 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 MMP26Q9NRE1 261 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 ANKMY1Q9P2S6 941 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 GMPPBQ9Y5P6 360 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 MYO10Q9HD67 2058 aa2.25□□□□□ -2.05
SCFD1-216ENST00000555550 FAM166BA8MTA8 275 aa2.24□□□□□ -2.05
SCFD1-216ENST00000555550 ERVV-1B6SEH8 477 aa2.24□□□□□ -2.05
SCFD1-216ENST00000555550 H3BTX0 84 aa2.24□□□□□ -2.05
SCFD1-216ENST00000555550 TRAF3IP2O43734 574 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms