RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TMEM89A2RUT3 159 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 TGDSO95455 350 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 CXCL14O95715 111 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 INSP01308 110 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 GNSP15586 552 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 ZNF823P16415 610 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 RCC1P18754 421 aaPredicted RBP1.89□□□□□ -2.11
SNX6-204ENST00000555541 GCKP35557 465 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 KIR2DS2P43631 304 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 DHPSP49366 369 aaPredicted RBP1.89□□□□□ -2.11
SNX6-204ENST00000555541 SUCLG1P53597 346 aaKnown RBP1.89□□□□□ -2.11
SNX6-204ENST00000555541 APOC4P55056 127 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 HERVK_113P61574 105 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 MRPS6P82932 125 aaKnown RBP1.89□□□□□ -2.11
SNX6-204ENST00000555541 VLDLRP98155 873 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 GALK2Q01415 458 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 SMU1Q2TAY7 513 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 FAM120AOSQ5T036 256 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 LRRC31Q6UY01 552 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 DLEU7Q6UYE1 221 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 ZFP2Q6ZN57 461 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 DNM1P46Q6ZS02 220 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 P4HA3Q7Z4N8 544 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 IFNEQ86WN2 208 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 LYPD1Q8N2G4 141 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 FAM71E2Q8N5Q1 922 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 ARFGAP2Q8N6H7 521 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 NMNAT2Q9BZQ4 307 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 NARFLQ9H6Q4 476 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 ZDHHC11Q9H8X9 412 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 SH2D2AQ9NP31 389 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 NDUFA13Q9P0J0 144 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 GALPQ9UBC7 116 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 ZNF225Q9UK10 706 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 IFT52Q9Y366 437 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 WDR45Q9Y484 360 aa1.89□□□□□ -2.11
SNX6-204ENST00000555541 IGLV4-60A0A075B6I1 120 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.88□□□□□ -2.11
SNX6-204ENST00000555541 KIR2DL5BA0A0G2JN68 375 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 KIR2DL5BA0A0G2JPC4 375 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 A6NDX4 124 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 ZSCAN5BA6NJL1 495 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 ZNF264O43296 627 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 AKR7A3O95154 331 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 MMP1P03956 469 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 CCNCP24863 283 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 SLC6A8P48029 635 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 RPL8P62917 257 aaKnown RBP1.88□□□□□ -2.11
SNX6-204ENST00000555541 HERVK_113P63132 956 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 ERVK-8P63133 956 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 KARSQ15046 597 aaKnown RBP1.88□□□□□ -2.11
SNX6-204ENST00000555541 SYPL1Q16563 259 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 AGKQ53H12 422 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 ARMC3Q5W041 872 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 PAQR9Q6ZVX9 377 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 ZNF429Q86V71 674 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 SAXO1Q8IYX7 474 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 KIR2DL5AQ8N109 375 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 TMEM252Q8N6L7 170 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 LRRC17Q8N6Y2 441 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 NKAIN3Q8N8D7 197 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 Q8N9W7 124 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 ST7LQ8TDW4 575 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 DTD2Q96FN9 168 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 ERVK-6Q9BXR3 956 aa1.88□□□□□ -2.11
SNX6-204ENST00000555541 RSPO3Q9BXY4 272 aaPredicted RBP1.88□□□□□ -2.11
SNX6-204ENST00000555541 UBQLN1Q9UMX0 589 aaKnown RBP1.88□□□□□ -2.11
SNX6-204ENST00000555541 IGLV4-69A0A075B6H9 119 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 A0A1W2PRV1 198 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 TTC26A0AVF1 554 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 K7N7A8 449 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 MAGP20916 626 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 AQP1P29972 269 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 HPDP32754 393 aaPredicted RBP1.87□□□□□ -2.11
SNX6-204ENST00000555541 CASP3P42574 277 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 TNNT3P45378 269 aaPredicted RBP1.87□□□□□ -2.11
SNX6-204ENST00000555541 LHX2P50458 406 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 PPP1R8Q12972 351 aaKnown RBP1.87□□□□□ -2.11
SNX6-204ENST00000555541 UNC119Q13432 240 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 TOR1AIP1Q5JTV8 583 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 PVRIGQ6DKI7 326 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 ARSKQ6UWY0 536 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 LINC01551Q86U37 167 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 LCA5Q86VQ0 697 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 PTP4A1Q93096 173 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 ADIPOR1Q96A54 375 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 ARHGDIGQ99819 225 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 CHIAQ9BZP6 476 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 DCDC2Q9UHG0 476 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 USP16Q9Y5T5 823 aa1.87□□□□□ -2.11
SNX6-204ENST00000555541 SLIT3O75094 1523 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 A0A0U1RRA0 63 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 NKX2-6A6NCS4 301 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 A8MUA0 341 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 TMX2-CTNND1H3BSU7 103 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 ALOX15BO15296 676 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 NBR2O15453 112 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 TRIM3O75382 744 aaPredicted RBP1.86□□□□□ -2.11
SNX6-204ENST00000555541 PCCAP05165 728 aaPredicted RBP1.86□□□□□ -2.11
SNX6-204ENST00000555541 CD5P06127 495 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms