RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 DPY19L1Q2PZI1 675 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 CEP85LQ5SZL2 805 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 RAET1LQ5VY80 246 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 APOOLQ6UXV4 268 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 SPNS3Q6ZMD2 512 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 SZRD1Q7Z422 152 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 GRAMD2AQ8IUY3 354 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 GTPBP8Q8N3Z3 284 aaPredicted RBP10.69□□□□□ -0.7
VRK1-204ENST00000555351 METTL25Q8N6Q8 603 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 ZNF781Q8N8C0 355 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 ZNF527Q8NB42 609 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 OR8J2Q8NGG1 315 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 ZBTB8AQ96BR9 441 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 C1orf50Q9BV19 199 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 DUSP26Q9BV47 211 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 PAQR5Q9NXK6 330 aaPredicted RBP10.69□□□□□ -0.7
VRK1-204ENST00000555351 GIMAP2Q9UG22 337 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 FAF1Q9UNN5 650 aaPredicted RBP10.69□□□□□ -0.7
VRK1-204ENST00000555351 RPH3AQ9Y2J0 694 aaPredicted RBP10.69□□□□□ -0.7
VRK1-204ENST00000555351 ZNF337Q9Y3M9 751 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 CSMD1Q96PZ7 3565 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 KIAA1549Q9HCM3 1950 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 ANKRD17O75179 2603 aaKnown RBP10.68□□□□□ -0.7
VRK1-204ENST00000555351 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 TUBAL3A6NHL2 446 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 SLC22A20A6NK97 555 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 DUXAA6NLW8 204 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 A8MXE2 369 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 RNASET2O00584 256 aaKnown RBP10.68□□□□□ -0.7
VRK1-204ENST00000555351 SCDO00767 359 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 ITM2AO43736 263 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 TNFSF13O75888 250 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 AK1P00568 194 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 GUSBP08236 651 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 G6PDP11413 515 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 EPXP11678 715 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 FCGR2AP12318 317 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 RFX3P48380 749 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 SLC1A6P48664 564 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 SUMO3P55854 103 aaPredicted RBP10.68□□□□□ -0.7
VRK1-204ENST00000555351 FOXF2Q12947 444 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 STX5Q13190 355 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 LASP1Q14847 261 aaKnown RBP10.68□□□□□ -0.7
VRK1-204ENST00000555351 TESK1Q15569 626 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 AP1ARQ63HQ0 302 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 TMEM200AQ86VY9 491 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 KRTCAP2Q8N6L1 136 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 ADAMTS15Q8TE58 950 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 OIT3Q8WWZ8 545 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 NINJ1Q92982 152 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 TESCQ96BS2 214 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 C16orf58Q96GQ5 468 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 PKNOX2Q96KN3 472 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 SORT1Q99523 831 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 CXorf36Q9H7Y0 433 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 AKTIPQ9H8T0 292 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 RASSF1Q9NS23 344 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 GPATCH2Q9NW75 528 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 CRIM1Q9NZV1 1036 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 PACSIN3Q9UKS6 424 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 SNX8Q9Y5X2 465 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 ANKHD1Q8IWZ3 2542 aaKnown RBP10.68□□□□□ -0.7
VRK1-204ENST00000555351 CSMD2Q7Z408 3487 aa10.68□□□□□ -0.7
VRK1-204ENST00000555351 A0A1W2PNV4 684 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 A6NNC1 897 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 C17orf51A8MQB3 221 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 EEF1E1-BLOC1S5C9J1V9 151 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 H3BNH8 94 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 EEF1E1O43324 174 aaKnown RBP10.67□□□□□ -0.7
VRK1-204ENST00000555351 ERLIN1O75477 346 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 C6orf47O95873 294 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 TGM6O95932 706 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 ATP6V1C1P21283 382 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 ADH6P28332 368 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 EIF1P41567 113 aaKnown RBP10.67□□□□□ -0.7
VRK1-204ENST00000555351 CLNS1AP54105 237 aaKnown RBP10.67□□□□□ -0.7
VRK1-204ENST00000555351 CLDN15P56746 228 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 HBA1P69905 142 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 STX3Q13277 289 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 TP53BP2Q13625 1128 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 MPP2Q14168 576 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 PDCD2Q16342 344 aaPredicted RBP10.67□□□□□ -0.7
VRK1-204ENST00000555351 SPDYE7PQ495Y7 208 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 ANXA8L1Q5VT79 327 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 OGFOD2Q6N063 350 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 FIGNL1Q6PIW4 674 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 P4HA3Q7Z4N8 544 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 WDR75Q8IWA0 830 aaKnown RBP10.67□□□□□ -0.7
VRK1-204ENST00000555351 ZZZ3Q8IYH5 903 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 VPS37AQ8NEZ2 397 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 RAB3IL1Q8TBN0 382 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 MIPOL1Q8TD10 442 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 JADE3Q92613 823 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 INTS12Q96CB8 462 aaKnown RBP10.67□□□□□ -0.7
VRK1-204ENST00000555351 DACH2Q96NX9 599 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 RBM24Q9BX46 236 aaKnown RBP10.67□□□□□ -0.7
VRK1-204ENST00000555351 C20orf27Q9GZN8 174 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 MEAF6Q9HAF1 191 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 KCNK9Q9NPC2 374 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms