RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CELF3Q5SZQ8 465 aaKnown RBP4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 ATAD3CQ5T2N8 411 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 OR8G2PQ6IF36 304 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 BAIAP2L2Q6UXY1 529 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 CYS1Q717R9 158 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 DPY19L4Q7Z388 723 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 GRAMD2AQ8IUY3 354 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 NAXDQ8IW45 347 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 HSCBQ8IWL3 235 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 MCOLN2Q8IZK6 566 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 IL1F10Q8WWZ1 152 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 MYLPFQ96A32 169 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 RAB7BQ96AH8 199 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 CASD1Q96PB1 797 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 RANBP9Q96S59 729 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 CALHM2Q9HA72 323 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 CUX1P39880 1505 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 FHAD1B1AJZ9 1412 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 EEA1Q15075 1411 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZSCAN5BA6NJL1 495 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 FAM220BPB1ANY3 271 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 TBX19O60806 448 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 UFL1O94874 794 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 CLUP10909 449 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 DRD5P21918 477 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 NF2P35240 595 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 DSCR10P59022 87 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 RGS1Q08116 209 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 PEX6Q13608 980 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 CHI3L2Q15782 390 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 MAPK6Q16659 721 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 SLC25A30Q5SVS4 291 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZNF57Q68EA5 555 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 BLOC1S2Q6QNY1 142 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZDHHC21Q8IVQ6 265 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 ARL6IP6Q8N6S5 226 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 GMCL1P1Q8NEA9 526 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 C18orf25Q96B23 403 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 TMEM80Q96HE8 168 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 VPS39Q96JC1 886 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 TM2D1Q9BX74 207 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 PALMDQ9NP74 551 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 AATFQ9NY61 560 aaKnown RBP eCLIP4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 ANAPC7Q9UJX3 599 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 SMC3Q9UQE7 1217 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 NAALAD2Q9Y3Q0 740 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 DDX49Q9Y6V7 483 aaKnown RBP4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 ERCC6L2Q5T890 1561 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 TOP2BQ02880 1626 aa4.13□□□□□ -1.75
CKS1BP1-201ENST00000555221 PPIAL4DF5H284 164 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 DUSP14O95147 198 aaKnown RBP4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 PSMA5P28066 241 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 MAGEA5P43359 124 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 RPL8P62917 257 aaKnown RBP4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 CSTF1Q05048 431 aaKnown RBP4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 CD47Q08722 323 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 SNTB2Q13425 540 aaKnown RBP4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 SERTAD2Q14140 314 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 TGIF1Q15583 401 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 QRICH1Q2TAL8 776 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 NADK2Q4G0N4 442 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 MARC1Q5VT66 337 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 GALNT17Q6IS24 598 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZNF774Q6NX45 483 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 SPEM1Q8N4L4 309 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 CSNK1A1LQ8N752 337 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 CCDC26Q8TAB7 109 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 NANPQ8TBE9 248 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 RAET1EQ8TD07 263 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 CCT8L2Q96SF2 557 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 GLT8D2Q9H1C3 349 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 GSTK1Q9Y2Q3 226 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 OR10H1Q9Y4A9 318 aa4.12□□□□□ -1.75
CKS1BP1-201ENST00000555221 ERICH3Q5RHP9 1530 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZNF608Q9ULD9 1512 aaPredicted RBP4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 OR6C65A6NJZ3 312 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 STX7O15400 261 aaKnown RBP4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 THY1P04216 161 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 CD55P08174 381 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 SLC35E2P0CK97 266 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 ATP6V1C1P21283 382 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 HNRNPA2B1P22626 353 aaKnown RBP4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 IGHV1-2P23083 117 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 OTX2P32243 289 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 CXCL6P80162 114 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZNF154Q13106 437 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 PDK4Q16654 411 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 RABGAP1LQ5R372 815 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 METTL11BQ5VVY1 283 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 PVRIGQ6DKI7 326 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 GPD1LQ8N335 351 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZNF540Q8NDQ6 660 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 KLHL30-AS1Q8NEE0 82 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 PNPT1Q8TCS8 783 aaKnown RBP4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 ADAMTS16Q8TE57 1224 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 SPRYD4Q8WW59 207 aaPredicted RBP4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 TRIM44Q96DX7 344 aaPredicted RBP4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 SIGLEC12Q96PQ1 595 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 DUSP16Q9BY84 665 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms