RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 EPM2AB3EWF7 344 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 OR7A17O14581 309 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 SNRPCP09234 159 aaKnown RBP4.37□□□□□ -1.71
PSEN1-211ENST00000554995 PVRP15151 417 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 ATP5A1P25705 553 aaKnown RBP4.37□□□□□ -1.71
PSEN1-211ENST00000554995 GDI1P31150 447 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 GNPDA1P46926 289 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 PRELPP51888 382 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 CD300CQ08708 224 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 FGL1Q08830 312 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 MXD4Q14582 209 aaPredicted RBP4.37□□□□□ -1.71
PSEN1-211ENST00000554995 TMEM44Q2T9K0 475 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 VWA2Q5GFL6 755 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 ZNF613Q6PF04 617 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 PHC2Q8IXK0 858 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 LRRC75A-AS1Q8N1F1 130 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 BPIFB2Q8N4F0 458 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 C4orf32Q8N8J7 132 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 OR56B2PQ8NGI1 322 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 OR4D5Q8NGN0 318 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 NT5C3BQ969T7 300 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 C7orf34Q96L11 122 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 MCRIP2Q9BUT9 160 aaKnown RBP4.37□□□□□ -1.71
PSEN1-211ENST00000554995 DUSP16Q9BY84 665 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 MUTYHQ9UIF7 546 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 MRPL11Q9Y3B7 192 aaKnown RBP4.37□□□□□ -1.71
PSEN1-211ENST00000554995 NPIPA7E9PJI5 369 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 H0Y8G0 127 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 LCMT2O60294 686 aaKnown RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 SRPX2O60687 465 aaPredicted RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 TRIM3O75382 744 aaPredicted RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 CA1P00915 261 aaPredicted RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 SERPINA3P01011 423 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 NPIPA8P0DM63 369 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 DBTP11182 482 aaKnown RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 IGFBP5P24593 272 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 ETV5P41161 510 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 AP3M2P53677 418 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 ACTR3P61158 418 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 RPL8P62917 257 aaKnown RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 BEX3Q00994 111 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 NCBP1Q09161 790 aaKnown RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 PEX6Q13608 980 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 CYLC2Q14093 348 aaPredicted RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 MESDQ14696 234 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 GANABQ14697 944 aaKnown RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 CNPY1Q3B7I2 92 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 PHYHD1Q5SRE7 291 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 DCST2Q5T1A1 773 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 LGSNQ5TDP6 509 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 OR8G2PQ6IF36 304 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 TAS2R42Q7RTR8 314 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 IFNEQ86WN2 208 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 LRRC49Q8IUZ0 686 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 OR4Q3Q8NH05 313 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 OR1F12Q8NHA8 337 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 AMBNQ9NP70 447 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 FAM120CQ9NX05 1096 aaKnown RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 ELOVL2Q9NXB9 296 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 CDH9Q9ULB4 789 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 NPIPA1Q9UND3 350 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 NTNG1Q9Y2I2 539 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 ERCC6Q03468 1493 aa4.36□□□□□ -1.71
PSEN1-211ENST00000554995 ZCCHC6Q5VYS8 1495 aaKnown RBP4.36□□□□□ -1.71
PSEN1-211ENST00000554995 IGHV3OR16-10A0A075B7F0 116 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 A0A1B0GTH9 108 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 OR6C65A6NJZ3 312 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 MSH4O15457 936 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 IRX1P78414 480 aaPredicted RBP4.35□□□□□ -1.71
PSEN1-211ENST00000554995 ELAVL2Q12926 359 aaKnown RBP4.35□□□□□ -1.71
PSEN1-211ENST00000554995 IL18R1Q13478 541 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 SLC5A12Q1EHB4 618 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 SNAI3Q3KNW1 292 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 CFAP221Q4G0U5 840 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 ZNF506Q5JVG8 444 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 FAM182AQ5T1J6 154 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 TPGS2Q68CL5 300 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 CCDC80Q76M96 950 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 APTXQ7Z2E3 356 aaKnown RBP4.35□□□□□ -1.71
PSEN1-211ENST00000554995 MOB3BQ86TA1 216 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 ZNF329Q86UD4 541 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 ERICH1Q86X53 443 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 SLC22A9Q8IVM8 553 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 OR5L2Q8NGL0 311 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 ZNF671Q8TAW3 534 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 PIWIL1Q96J94 861 aaKnown RBP4.35□□□□□ -1.71
PSEN1-211ENST00000554995 C18orf12Q96KH6 178 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 LINC00479Q96M42 142 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 C9orf85Q96MD7 179 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 AGAP3Q96P47 875 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 NPY6RQ99463 290 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 LRRC61Q9BV99 259 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 NXF5Q9H1B4 397 aaKnown RBP4.35□□□□□ -1.71
PSEN1-211ENST00000554995 IKZF5Q9H5V7 419 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 SLC17A5Q9NRA2 495 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 ZNF221Q9UK13 617 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 MEMO1Q9Y316 297 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 ALG6Q9Y672 507 aa4.35□□□□□ -1.71
PSEN1-211ENST00000554995 FRMPD4Q14CM0 1322 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms