RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 ATP6AP1LQ52LC2 224 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 CCNJQ5T5M9 372 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 OGFOD2Q6N063 350 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 CDC20BQ86Y33 519 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 PSMA8Q8TAA3 256 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 FIG4Q92562 907 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 ZNF75CPQ92670 426 aaPredicted RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 SH3YL1Q96HL8 342 aaPredicted RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 LMF2Q9BU23 707 aaKnown RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 G6PC3Q9BUM1 346 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 PRRG4Q9BZD6 226 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 RASSF1Q9NS23 344 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 SIRT3Q9NTG7 399 aaPredicted RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 FBXO34Q9NWN3 711 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 FAM120CQ9NX05 1096 aaKnown RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 FOXD3Q9UJU5 478 aaPredicted RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 ARHGAP21Q5T5U3 1957 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 NUP214P35658 2090 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ADGRG4Q8IZF6 3080 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 A0A1W2PRB8 838 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 OR2M5A3KFT3 312 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 SLC22A20A6NK97 555 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 HMGB1P1B2RPK0 211 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 NDUFB5O43674 189 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 SCN2BO60939 215 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ALDOCP09972 364 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 LAMP1P11279 417 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 G6PDP11413 515 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 EPXP11678 715 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 MAPK1P28482 360 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 HPCAL1P37235 193 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 PEX19P40855 299 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ASMTP46597 345 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 KCNJ5P48544 419 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 B3GALT5-AS1P59052 145 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 C17orf67Q0P5P2 114 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 MLC1Q15049 377 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 PGS1Q32NB8 556 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 CPTPQ5TA50 214 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 IL23RQ5VWK5 629 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 APOOLQ6UXV4 268 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 R3HCC1LQ7Z5L2 792 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ZAR1Q86SH2 424 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 WDR75Q8IWA0 830 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 KRTCAP2Q8N6L1 136 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 COX18Q8N8Q8 333 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 FADS6Q8N9I5 356 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 CDRT4Q8N9R6 151 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 FNDC5Q8NAU1 212 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 SLC16A11Q8NCK7 471 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 OR4C3Q8NH37 302 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 TUBGCP3Q96CW5 907 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 C1GALT1C1Q96EU7 318 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 GIMAP5Q96F15 307 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ZNF845Q96IR2 970 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 PAIP2Q9BPZ3 127 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 PIGQQ9BRB3 760 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 SFXN3Q9BWM7 321 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 NUF2Q9BZD4 464 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ACSS1Q9NUB1 689 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ZCCHC3Q9NUD5 404 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ARGLU1Q9NWB6 273 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 GIN1Q9NXP7 522 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 GALNT8Q9NY28 637 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 NKIRAS1Q9NYS0 192 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 CLCF1Q9UBD9 225 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 ABCG2Q9UNQ0 655 aa11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 MRPS18CQ9Y3D5 142 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-202ENST00000554877 TEP1Q99973 2627 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 NPIPA5A0A0B4J1W7 369 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 A0A1W2PNV4 684 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 NPIPA7E9PJI5 369 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 EIF1AYO14602 144 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 DIAPH2O60879 1101 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 KCNK2O95069 426 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 IL18BPO95998 194 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 NPIPA8P0DM63 369 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 DNASE1P24855 282 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 CLDN15P56746 228 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 CLDN8P56748 225 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 CLDN20P56880 219 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 EEFSECP57772 596 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 PHC1P78364 1004 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 FAM27E3Q08E93 113 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 TP53BP2Q13625 1128 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 LASP1Q14847 261 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 DUSP5Q16690 384 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 VWA1Q6PCB0 445 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 KIRREL3Q8IZU9 778 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 CDS1Q92903 461 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 C7orf26Q96N11 449 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 MS4A4EQ96PG1 132 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 OPN3Q9H1Y3 402 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 ACBD3Q9H3P7 528 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 CLEC4AQ9UMR7 237 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 SPG11Q96JI7 2443 aa11.11□□□□□ -0.63
CCDC85C-202ENST00000554877 MPDZO75970 2070 aa11.1□□□□□ -0.63
CCDC85C-202ENST00000554877 OTOGQ6ZRI0 2925 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms