RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZSCAN12O43309 604 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 BCAS1O75363 584 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-213ENST00000554776 RHBDL1O75783 438 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 KBTBD11O94819 623 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 HPP00738 406 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 KRT8P05787 483 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 LAMP1P11279 417 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 CPN1P15169 458 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 BCL3P20749 454 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 PCMT1P22061 227 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 HTR2AP28223 471 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 CDH5P33151 784 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-213ENST00000554776 CHI3L1P36222 383 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-213ENST00000554776 PTGER3P43115 390 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 GNPDA1P46926 289 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 ACADVLP49748 655 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 PLA2G16P53816 162 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 ERVPABLB-1P60509 514 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 ST3GAL3Q11203 375 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 CUL1Q13616 776 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 SELPLGQ14242 412 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 TPD52L1Q16890 204 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-213ENST00000554776 MICAQ29983 383 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 EIPR1Q53HC9 387 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 CYBRD1Q53TN4 286 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 FAM120AOSQ5T036 256 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 ATF7IP2Q5U623 682 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 ACSM5Q6NUN0 579 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 STAC2Q6ZMT1 411 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 CEACAM19Q7Z692 300 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 ACOT1Q86TX2 421 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 MCOLN2Q8IZK6 566 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 BEST4Q8NFU0 473 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 SDSLQ96GA7 329 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 C1orf147Q96MC9 270 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-213ENST00000554776 C9orf85Q96MD7 179 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 ALG12Q9BV10 488 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 EDEM2Q9BV94 578 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 HCAR1Q9BXC0 346 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 IKZF5Q9H5V7 419 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 RAB18Q9NP72 206 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 CUTCQ9NTM9 273 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 SMPD3Q9NY59 655 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-213ENST00000554776 GNG12Q9UBI6 72 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 RNF6Q9Y252 685 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 MRPS33Q9Y291 106 aaKnown RBP2.4□□□□□ -2.03
SCFD1-213ENST00000554776 OR10H1Q9Y4A9 318 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 AGRNO00468 2067 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 ATAD2BQ9ULI0 1458 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PPIAL4CA0A0B4J2A2 164 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PPIAL4DF5H284 164 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 CLDN5O00501 218 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 BCL2L11O43521 198 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF354AO60765 605 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 TBX19O60806 448 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 SLC2A10O95528 541 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 CA1P00915 261 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 SNRPCP09234 159 aaKnown RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PPIAL4GP0DN37 164 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PDHBP11177 359 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 NT5EP21589 574 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ATP5A1P25705 553 aaKnown RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PSMA2P25787 234 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 HPCAL1P37235 193 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ELK3P41970 407 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ALDH3B2P48448 385 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 EMDP50402 254 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 UBE2HP62256 183 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PAX2Q02962 417 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF154Q13106 437 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ATXN7L3Q14CW9 347 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 CFAP157Q5JU67 520 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 C10orf120Q5SQS8 335 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ATAD3BQ5T9A4 648 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 LGSNQ5TDP6 509 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 MEDAGQ5VYS4 303 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 SEL1L3Q68CR1 1132 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 CASC1Q6TDU7 716 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF600Q6ZNG1 722 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 LRRC70Q7Z2Q7 622 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ANKRD37Q7Z713 158 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 VASH2Q86V25 355 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 TMEM17Q86X19 198 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ERICH1Q86X53 443 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 FGFRL1Q8N441 504 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 ZSCAN4Q8NAM6 433 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 OR52M1Q8NGK5 317 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 RAET1EQ8TD07 263 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 TRUB1Q8WWH5 349 aaKnown RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PPP1R16AQ96I34 528 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 CRACR2AQ9BSW2 395 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 TSSK1BQ9BXA7 367 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 POLD4Q9HCU8 107 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 MIEF1Q9NQG6 463 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PAK1IP1Q9NWT1 392 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 MRPL39Q9NYK5 338 aaKnown RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 RSPH14Q9UHP6 348 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 PTBP2Q9UKA9 531 aaKnown RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 EIF3LQ9Y262 564 aaKnown RBP2.39□□□□□ -2.03
SCFD1-213ENST00000554776 GMPPBQ9Y5P6 360 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms