RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 DEFB126Q9BYW3 111 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 C2orf42Q9NWW7 574 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 HEPACAM2A8MVW5 462 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 MC3RP41968 323 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 BCL2A1Q16548 175 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 TMEM150AQ86TG1 271 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 TMEM163Q8TC26 289 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 ADAMTS16Q8TE57 1224 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 CD300AQ9UGN4 299 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 IL1RNP18510 177 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 TNFSF8P32971 234 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 CSNK1DP48730 415 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 GRIN2CQ14957 1233 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 CTSL3PQ5NE16 218 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 OR5L2Q8NGL0 311 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 SAMD11Q96NU1 681 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 NAA11Q9BSU3 229 aaPredicted RBP13.16□□□□□ -0.3
VTI1B-204ENST00000554659 CPEB1Q9BZB8 566 aaKnown RBP13.16□□□□□ -0.3
VTI1B-204ENST00000554659 SYNPO2LQ9H987 977 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 USP3Q9Y6I4 520 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 A0A1W2PQ09 198 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 TCRBV21S2A2A0A5A6 115 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 KIAA0355O15063 1070 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 PNMTP11086 282 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 ARHGAP19Q14CB8 494 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 GPR19Q15760 415 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 GPR139Q6DWJ6 353 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 NADSYN1Q6IA69 706 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 LSMEM2Q8N112 164 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 OR5D16Q8NGK9 328 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 SFXN5Q8TD22 340 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 GPR148Q8TDV2 347 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 LMF1Q96S06 567 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 ZFYVE21Q9BQ24 234 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 MYADML2A6NDP7 307 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 CNMDO75829 334 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 SYNGR4O95473 234 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 C21orf33P30042 268 aaPredicted RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 PER3P56645 1201 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 MFSD6LQ8IWD5 586 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 OR9A2Q8NGT5 310 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 DOK4Q8TEW6 326 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 ACOT11Q8WXI4 607 aaPredicted RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 MALSU1Q96EH3 234 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 RRNAD1Q96FB5 475 aaKnown RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 CDC6Q99741 560 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 C1QTNF2Q9BXJ5 285 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 PRDM9Q9NQV7 894 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 CERS1P27544 350 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF136P52737 540 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 NKPD1Q17RQ9 610 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 KCTD11Q693B1 232 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 AWAT2Q6E213 333 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 TCEAL8Q8IYN2 117 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 BOLLQ8N9W6 283 aaKnown RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 ABHD5Q8WTS1 349 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 PITX2Q99697 317 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 EVA1AQ9H8M9 152 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 C19orf12Q9NSK7 152 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 AK6Q9Y3D8 172 aaKnown RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 ATXN1LP0C7T5 689 aaKnown RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 SSTR4P31391 388 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 CAV3P56539 151 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 SELENOVP59797 346 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 FAM83HQ6ZRV2 1179 aaPredicted RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 ZMYND19Q96E35 227 aaPredicted RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 TGM7Q96PF1 710 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 CPPED1Q9BRF8 314 aaPredicted RBP13.15□□□□□ -0.3
VTI1B-204ENST00000554659 GON7Q9BXV9 100 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 SLC17A9Q9BYT1 436 aa13.15□□□□□ -0.3
VTI1B-204ENST00000554659 H3BUI4 141 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 TGM5O43548 720 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 DUX1O43812 170 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 CAV2P51636 162 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 TAS2R31P59538 309 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 MRPL49Q13405 166 aaKnown RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 SELPLGQ14242 412 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 CLLU1OSQ5K130 101 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 TRNP1Q6NT89 227 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ZC3H14Q6PJT7 736 aaKnown RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 KCTD20Q7Z5Y7 419 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 RETREG3Q86VR2 466 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 LRRC28Q86X40 367 aaPredicted RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 FAM83FQ8NEG4 500 aaPredicted RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 DNAAF1Q8NEP3 725 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 DCUN1D4Q92564 292 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 GPR34Q9UPC5 381 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 DNMT3AQ9Y6K1 912 aaPredicted RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 LAMB4A4D0S4 1761 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 LILRB5O75023 590 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 HMGN2P05204 90 aaKnown RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 CHRNB1P11230 501 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 BDKRB2P30411 391 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 CCR7P32248 378 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms