RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ADCY4Q8NFM4 1077 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 OR7G1Q8NGA0 311 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 MBD3L2Q8NHZ7 208 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-215ENST00000554656 FAM222BQ8WU58 562 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 RMND5BQ96G75 393 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-215ENST00000554656 APIPQ96GX9 242 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 G6PC3Q9BUM1 346 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 DLL4Q9NR61 685 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 EHD3Q9NZN3 535 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 JKAMPQ9P055 326 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 MCM8Q9UJA3 840 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 DLGAP4Q9Y2H0 992 aa9.62□□□□□ -0.87
SHMT2-215ENST00000554656 A0A1W2PPR1 153 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 SNPHO15079 494 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 UGT2B11O75310 529 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 NME6O75414 186 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 IL2RAP01589 272 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 ATP1B1P05026 303 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 HOXB4P17483 251 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 DDX5P17844 614 aaKnown RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 IL12AP29459 219 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 EMDP50402 254 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 MAPK12P53778 367 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 NRG3P56975 720 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 PSME3P61289 254 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 TRA2BP62995 288 aaKnown RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 MAP4K2Q12851 820 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 FOXF2Q12947 444 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 PTGR1Q14914 329 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 DAZAP2Q15038 168 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 CCNYL2Q5T2Q4 361 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 PAMR1Q6UXH9 720 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 IKBIPQ70UQ0 350 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 CAMKMTQ7Z624 323 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 PACS2Q86VP3 889 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 C10orf67Q8IYJ2 551 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 PM20D2Q8IYS1 436 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 C1orf52Q8N6N3 182 aaKnown RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 ABTB1Q969K4 478 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 TM4SF18Q96CE8 201 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 CTHRC1Q96CG8 243 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 MTERF3Q96E29 417 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 OMA1Q96E52 524 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 HSPBAP1Q96EW2 488 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 CNRIP1Q96F85 164 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 ZNF764Q96H86 408 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 TEX37Q96LM6 180 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 ZNF681Q96N22 645 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 TRIB1Q96RU8 372 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 TUBA1CQ9BQE3 449 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 THTPAQ9BU02 230 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 OSBPL11Q9BXB4 747 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 METTL7AQ9H8H3 244 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 ANKRA2Q9H9E1 313 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 SERHLQ9NQF3 203 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 ZNF629Q9UEG4 869 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-215ENST00000554656 BCAP29Q9UHQ4 241 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 AP3M1Q9Y2T2 418 aa9.61□□□□□ -0.87
SHMT2-215ENST00000554656 NSD1Q96L73 2696 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 C17orf51A8MQB3 221 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 EEF1E1-BLOC1S5C9J1V9 151 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 FXYD1O00168 92 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 EEF1E1O43324 174 aaKnown RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 TBX19O60806 448 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 DNAJA2O60884 412 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 ICOSLGO75144 302 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 ERAL1O75616 437 aaKnown RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 ANXA4P09525 319 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 CTSSP25774 331 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 HPCAL1P37235 193 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 NME5P56597 212 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 RAE1P78406 368 aaKnown RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 MRPS35P82673 323 aaKnown RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 ZNF763Q0D2J5 394 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 TOMM20Q15388 145 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 VPS26BQ4G0F5 336 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 TRMT12Q53H54 448 aaKnown RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 SAMD4BQ5PRF9 694 aaKnown RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 R3HCC1LQ7Z5L2 792 aaKnown RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 ADGRE4PQ86SQ3 457 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 NATD1Q8N6N6 113 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 WDSUB1Q8N9V3 476 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 OR52R1Q8NGF1 315 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 OR8J2Q8NGG1 315 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 OR1J4Q8NGS1 313 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 LINC01560Q8TB33 94 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 JADE3Q92613 823 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 LRRC58Q96CX6 371 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 MBD6Q96DN6 1003 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 LCORQ96JN0 433 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 ALPK1Q96QP1 1244 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 PRPF18Q99633 342 aaKnown RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 OR2B2Q9GZK3 357 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 GSX1Q9H4S2 264 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-215ENST00000554656 RMND5AQ9H871 391 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 CALHM2Q9HA72 323 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 MYNNQ9NPC7 610 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 SPAG4Q9NPE6 437 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms