RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CYHR1Q6ZMK1 362 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 C17orf64Q86WR6 236 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 PM20D2Q8IYS1 436 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 LRRC25Q8N386 305 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 RASGEF1CQ8N431 466 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 GALNT4Q8N4A0 578 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 TBC1D19Q8N5T2 526 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 OTUD6BQ8N6M0 293 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 GPATCH11Q8N954 259 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 PCYOX1LQ8NBM8 494 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 ADPRHL1Q8NDY3 354 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 OR4K1Q8NGD4 311 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 OR8K3Q8NH51 312 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NEIL3Q8TAT5 605 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NT5CQ8TCD5 201 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 UTP15Q8TED0 518 aaKnown RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 LPGAT1Q92604 370 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 KRT35Q92764 455 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 KCNJ9Q92806 393 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 DAZLQ92904 295 aaKnown RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NTNG2Q96CW9 530 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 CCL19Q99731 98 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 RBM24Q9BX46 236 aaKnown RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NUAK2Q9H093 628 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 RHBGQ9H310 441 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NHEJ1Q9H9Q4 299 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 LIN28AQ9H9Z2 209 aaKnown RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 CALHM2Q9HA72 323 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 CHRAC1Q9NRG0 131 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 THAP1Q9NVV9 213 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 GALPQ9UBC7 116 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 BOKQ9UMX3 212 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 ATG4BQ9Y4P1 393 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 CLCA3PQ9Y6N3 262 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 MAP1AP78559 2803 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NSD1Q96L73 2696 aaPredicted RBP4.4□□□□□ -1.7
ATXN3-228ENST00000554592 C15orf38-AP3S2A0A0A6YYH1 394 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 TRBC2A0A5B9 178 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 AP3B1O00203 1094 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PHF1O43189 567 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 IFNA16P05015 189 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PTMAP06454 111 aaKnown RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ENO1P06733 434 aaKnown RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 SMIM10L1P0DMW3 83 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CCL3P10147 92 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ENO3P13929 434 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 TNNI3P19429 210 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CTNNA1P35221 906 aaKnown RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 AHRP35869 848 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 FDFT1P37268 417 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PIGAP37287 484 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 GRIA1P42261 906 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 MAGEA1P43355 309 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CPA2P48052 419 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 TRPC1P48995 793 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 NPY2RP49146 381 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PCYT1AP49585 367 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 MVDP53602 400 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 RWDD2BP57060 319 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 RAB8AP61006 207 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 TNK1Q13470 666 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 NAE1Q13564 534 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ALKBH1Q13686 389 aaKnown RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 SEC23BQ15437 767 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CHRFAM7AQ494W8 412 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PIGGQ5H8A4 983 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 C11orf63Q6NUN7 778 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 AGTRAPQ6RW13 159 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 LCTLQ6UWM7 567 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PLEKHM3Q6ZWE6 761 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CA13Q8N1Q1 262 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PRELID2Q8N945 189 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 MORN4Q8NDC4 146 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 C7orf57Q8NEG2 295 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ST8SIA4Q92187 359 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 RNFT2Q96EX2 444 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 SMIM10Q96HG1 83 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CHP1Q99653 195 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 WDR83Q9BRX9 315 aaKnown RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 HAUS8Q9BT25 410 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ABHD14AQ9BUJ0 271 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 SFXN3Q9BWM7 321 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 NPLQ9BXD5 320 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CTDSP1Q9GZU7 261 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PAIP1Q9H074 479 aaKnown RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PIGMQ9H3S5 423 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 GOLPH3Q9H4A6 298 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 UBTD1Q9HAC8 227 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 SH2D2AQ9NP31 389 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ADAP2Q9NPF8 381 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 PRTFDC1Q9NRG1 225 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 YAE1D1Q9NRH1 226 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 TREX1Q9NSU2 369 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF701Q9NV72 531 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 TRMT1Q9NXH9 659 aaKnown RBP4.4□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF226Q9NYT6 803 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CNIH4Q9P003 139 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 C6orf203Q9P0P8 240 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms