RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 GIN1Q9NXP7 522 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 ALKBH4Q9NXW9 302 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 TAS2R10Q9NYW0 307 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 FBXL2Q9UKC9 423 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 SLC6A5Q9Y345 797 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 MRPS18CQ9Y3D5 142 aaKnown RBP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 SNX8Q9Y5X2 465 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 INTS1Q8N201 2190 aaKnown RBP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 NUP214P35658 2090 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-211ENST00000554310 GOLGA8QA0A0J9YX86 632 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 GXYLT2A0PJZ3 443 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 GOLGA8OA6NCC3 632 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 GOLGA8NF8WBI6 632 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 UTS2O95399 124 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 C6orf47O95873 294 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 HMGN2P05204 90 aaKnown RBP11.87□□□□□ -0.51
SHMT2-211ENST00000554310 NGFRP08138 427 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 COX6B1P14854 86 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 TP53BP2Q13625 1128 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 GANABQ14697 944 aaKnown RBP11.87□□□□□ -0.51
SHMT2-211ENST00000554310 LASP1Q14847 261 aaKnown RBP11.87□□□□□ -0.51
SHMT2-211ENST00000554310 DUSP5Q16690 384 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 DPY19L1Q2PZI1 675 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 SPDYE7PQ495Y7 208 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 DCST1Q5T197 706 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 AAGABQ6PD74 315 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 BHLHB9Q6PI77 547 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 ENPP6Q6UWR7 440 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 LACC1Q8IV20 430 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 CCDC71Q8IV32 467 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-211ENST00000554310 FADS6Q8N9I5 356 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 SLC16A11Q8NCK7 471 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 OR10Q1Q8NGQ4 319 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 MCUR1Q96AQ8 359 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 TESCQ96BS2 214 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 CMTM5Q96DZ9 223 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 OR52B2Q96RD2 323 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 TBL1XR1Q9BZK7 514 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 ZNF385DQ9H6B1 395 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 CXorf36Q9H7Y0 433 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 DUSP22Q9NRW4 184 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 FLRT3Q9NZU0 649 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 CAMK2AQ9UQM7 478 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 APCP25054 2843 aa11.87□□□□□ -0.51
SHMT2-211ENST00000554310 LRBAP50851 2863 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 IGLV3-32A0A0A0MS00 114 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 A0A0G2JNJ9 132 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 FAM90A27PA6NNH2 459 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 RNASET2O00584 256 aaKnown RBP11.86□□□□□ -0.51
SHMT2-211ENST00000554310 SDHDO14521 159 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 CFLARO15519 480 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 SOX30O94993 753 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 KCNK2O95069 426 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 EPPINO95925 133 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 IGKV1D-16P01601 117 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 CPN1P15169 458 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 NCF2P19878 526 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-211ENST00000554310 DPP4P27487 766 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 SOAT1P35610 550 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 KIR3DL1P43629 444 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 ZFP36L2P47974 494 aaKnown RBP11.86□□□□□ -0.51
SHMT2-211ENST00000554310 CCT3P49368 545 aaKnown RBP11.86□□□□□ -0.51
SHMT2-211ENST00000554310 CLNS1AP54105 237 aaKnown RBP11.86□□□□□ -0.51
SHMT2-211ENST00000554310 GFRA1P56159 465 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 DSCR4P56555 118 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-211ENST00000554310 KLF10Q13118 480 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 STX5Q13190 355 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 RCAN2Q14206 197 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 PGS1Q32NB8 556 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 SLC25A35Q3KQZ1 300 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 GRAMD1BQ3KR37 738 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 OR5M10Q6IEU7 315 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 CDC73Q6P1J9 531 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 ACBD4Q8NC06 268 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 RBM15BQ8NDT2 890 aaKnown RBP11.86□□□□□ -0.51
SHMT2-211ENST00000554310 OR2M3Q8NG83 312 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 OR8J2Q8NGG1 315 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 FAM110BQ8TC76 370 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 ACTRT2Q8TDY3 377 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 WDYHV1Q96HA8 205 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 SFXN2Q96NB2 322 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 G6PC3Q9BUM1 346 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 BTBD2Q9BX70 525 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 ACTRT3Q9BYD9 372 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 DPY30Q9C005 99 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 PIGUQ9H490 435 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 PTGES2Q9H7Z7 377 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 KCNJ16Q9NPI9 418 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 Q9UFV3 132 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 FAF1Q9UNN5 650 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-211ENST00000554310 DOCK7Q96N67 2140 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 HCFC1P51610 2035 aa11.86□□□□□ -0.51
SHMT2-211ENST00000554310 ADGRG4Q8IZF6 3080 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 CD8B2A6NJW9 211 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 HSPB2A8KAH6 182 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 C17orf51A8MQB3 221 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 B4DXG7 233 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 ALG1L2C9J202 215 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 E9PBE3 544 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 H0Y3Z8 333 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms