RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ANXA11P50995 505 aaKnown RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CRISP1P54107 249 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 DCDC1P59894 354 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 POLR2LP62875 67 aaKnown RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 PPP3R1P63098 170 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ARF5P84085 180 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 IFITM2Q01629 132 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SPIBQ01892 262 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 IRF8Q02556 426 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CFHR1Q03591 330 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF763Q0D2J5 394 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 GNA13Q14344 377 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SF3B4Q15427 424 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 DUSP7Q16829 419 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SYT16Q17RD7 645 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 GTDC1Q4AE62 458 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 KLHL22Q53GT1 634 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CCDC157Q569K6 752 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SGO1Q5FBB7 561 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ATAD3CQ5T2N8 411 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 PDZK1Q5T2W1 519 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 HIST2H2AA3Q6FI13 130 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 DHRS13Q6UX07 377 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CASP12Q6UXS9 341 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 PTCHD4Q6ZW05 846 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 HTR3DQ70Z44 454 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ZBTB46Q86UZ6 589 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 MARCH9Q86YJ5 346 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CCDC71Q8IV32 467 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 RASGRP3Q8IV61 690 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 GLB1L2Q8IW92 636 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 FAM217AQ8IXS0 508 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CMTM4Q8IZR5 234 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 RDH10Q8IZV5 341 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 TAGAPQ8N103 731 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 DCBLD1Q8N8Z6 715 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 OR8J1Q8NGP2 316 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SPPL2AQ8TCT8 520 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 DVL3Q92997 716 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ESAMQ96AP7 390 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 AP2M1Q96CW1 435 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ERLEC1Q96DZ1 483 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SIPA1Q96FS4 1042 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 WBP1Q96G27 269 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 TPD52L3Q96J77 140 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 APOLD1Q96LR9 279 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 OR2A14Q96R47 310 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ADOQ96SZ5 270 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CHCHD6Q9BRQ6 235 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 INPP5KQ9BT40 448 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 EFCAB11Q9BUY7 163 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SPATA5L1Q9BVQ7 753 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 TEX12Q9BXU0 123 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ANKRA2Q9H9E1 313 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 MSL2Q9HCI7 577 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 IL26Q9NPH9 171 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CD93Q9NPY3 652 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SACM1LQ9NTJ5 587 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 EXD2Q9NVH0 621 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 STMN3Q9NZ72 180 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 NDUFAF4Q9P032 175 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 THAP10Q9P2Z0 257 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 RABL2AQ9UBK7 228 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 KCND3Q9UK17 655 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 POU2F3Q9UKI9 436 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 RABL2BQ9UNT1 228 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CARD8Q9Y2G2 431 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 DLGAP4Q9Y2H0 992 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SLC27A6Q9Y2P4 619 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 GSTK1Q9Y2Q3 226 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 N6AMT1Q9Y5N5 214 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 STON1Q9Y6Q2 735 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ENPP4Q9Y6X5 453 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 DSPPQ9NZW4 1301 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PTPRBP23467 1997 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CEP192Q8TEP8 1941 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SMG1Q96Q15 3661 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PIKFYVEQ9Y2I7 2098 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MEIOCA2RUB1 952 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 WASH3PC4AMC7 463 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 GAPDHSO14556 408 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 TLX3O43711 291 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PRKYO43930 277 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 GUCY1B2O75343 617 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MFN2O95140 757 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 GADD45GO95257 159 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CISD3P0C7P0 127 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PRSS56P0CW18 603 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 NR2F6P10588 404 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PRKAR1AP10644 381 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CYP2A6P11509 494 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 OSMP13725 252 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MYL12AP19105 171 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 TCEA1P23193 301 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CORO1AP31146 461 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 TIA1P31483 386 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 TNFSF8P32971 234 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 IFNGR2P38484 337 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 IL12RB1P42701 662 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CDKN2CP42773 168 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms