RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 A0A1W2PS29 197 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 TRAPPC13A5PLN9 417 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CDHR4A6H8M9 788 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 TMEM150CB9EJG8 249 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 PTGES3LE9PB15 166 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 H3BMH7 237 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 SLC22A1O15245 554 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 LAMTOR5O43504 91 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 B4GAT1O43505 415 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 FCMRO60667 390 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 OR2B3O76000 313 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 EPPINO95925 133 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CBX7O95931 251 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 DCNP07585 359 aaKnown RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 HTR1AP08908 422 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CCNA2P20248 432 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 S1PR1P21453 382 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 AGXTP21549 392 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CD1CP29017 333 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 EPHA8P29322 1005 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 SLC5A2P31639 672 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 RBM34P42696 430 aaKnown RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 IDH2P48735 452 aaKnown RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 DCAF7P61962 342 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ZXDAP98168 799 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ACY1Q03154 408 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 EMX1Q04741 257 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 SIGLEC14Q08ET2 396 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF155Q12901 538 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 NR0B2Q15466 257 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 NEDD8Q15843 81 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 DEFB110Q30KQ9 67 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CYP27C1Q4G0S4 372 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 C12orf73Q69YU5 71 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 TMEM71Q6P5X7 295 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF613Q6PF04 617 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ISLR2Q6UXK2 745 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 RASSF6Q6ZTQ3 369 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 PTCHD4Q6ZW05 846 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 PLEKHM3Q6ZWE6 761 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 MBOAT2Q6ZWT7 520 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF550Q7Z398 422 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 DGLUCYQ7Z3D6 616 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 MRGPREQ86SM8 312 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 VRK2Q86Y07 508 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ANKRD13BQ86YJ7 626 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 RBM45Q8IUH3 476 aaKnown RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 LACC1Q8IV20 430 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CCDC71Q8IV32 467 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 SLC35F3Q8IY50 421 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF440Q8IYI8 595 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CYP4Z2PQ8N1L4 340 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 FAM26EQ8N5C1 309 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 TMEM52Q8NDY8 209 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 OR52R1Q8NGF1 315 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 OR51Q1Q8NH59 317 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 OR4C6Q8NH72 309 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 PIGXQ8TBF5 258 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 APH1BQ8WW43 257 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 OSTF1Q92882 214 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 NMD3Q96D46 503 aaKnown RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 MMABQ96EY8 250 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 MPP4Q96JB8 637 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ZC3H10Q96K80 434 aaKnown RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 VSTM2LQ96N03 204 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 SLC38A2Q96QD8 506 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 MCHR1Q99705 422 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 COPS4Q9BT78 406 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CDCA4Q9BXL8 241 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 POLDIP3Q9BY77 421 aaKnown RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 TRIM2Q9C040 744 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 CCDC90BQ9GZT6 254 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 FOLH1BQ9HBA9 442 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 STARD5Q9NSY2 213 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 MAN2C1Q9NTJ4 1040 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 UCKL1Q9NWZ5 548 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 PILRBQ9UKJ0 227 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 FBXO4Q9UKT5 387 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 MKLN1Q9UL63 735 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 TMEM5Q9Y2B1 443 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 RPL36Q9Y3U8 105 aaKnown RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 HEMK1Q9Y5R4 338 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-221ENST00000553498 TRPM6Q9BX84 2022 aa6.77□□□□□ -1.32
ATXN3-221ENST00000553498 REV3LO60673 3130 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 A0A1B0GX78 115 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 EME2A4GXA9 379 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 CLDN24A6NM45 220 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 OR6C76A6NM76 312 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 FAM227AF5H4B4 570 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 H3BMQ9 156 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 H3BN98 237 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 DSCR3O14972 297 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 POLR1CO15160 346 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 HCRTR1O43613 425 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 XPNPEP2O43895 674 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 SDC3O75056 442 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 CNOT3O75175 753 aaKnown RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 DNAJB6O75190 326 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms