RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 DAW1Q8N136 415 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 NAXEQ8NCW5 288 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 GIPC3Q8TF64 312 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ASZ1Q8WWH4 475 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 NAT6Q93015 286 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PHF21AQ96BD5 680 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 SLC22A18Q96BI1 424 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 TUBGCP3Q96CW5 907 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CHMP6Q96FZ7 201 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PCED1BQ96HM7 432 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF354BQ96LW1 612 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PPM1MQ96MI6 270 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 F2RL3Q96RI0 385 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 IL12RB2Q99665 862 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 OLFM1Q99784 485 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 BCL7BQ9BQE9 202 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 LSG1Q9H089 658 aaKnown RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 DPH5Q9H2P9 285 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 TCEAL2Q9H3H9 227 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 MAGIXQ9H6Y5 334 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 LIN28AQ9H9Z2 209 aaKnown RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 NMRK1Q9NWW6 199 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 OR6C2Q9NZP2 312 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 RCOR3Q9P2K3 495 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 UVRAGQ9P2Y5 699 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ENOPH1Q9UHY7 261 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CPSF3Q9UKF6 684 aaKnown RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 KCNJ14Q9UNX9 436 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PLA2G4CQ9UP65 541 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF175Q9Y473 711 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF469Q96JG9 3925 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 A0A1W2PP11 408 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 LOC390937A0A1W2PQ73 354 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 GMNCA6NCL1 334 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 EFCAB10A6NFE3 127 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 PRAMEF26H0Y7S4 382 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 H0YIV9 168 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 TMX2-CTNND1H3BSU7 103 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 RASGRF2O14827 1237 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 MAGEB3O15480 346 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 AQP9O43315 295 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 FAM189A1O60320 539 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 RNASEH1O60930 286 aaKnown RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 RSL1D1O76021 490 aaKnown RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 APOHP02749 345 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 IFNA16P05015 189 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 HSMCR30P0CW71 290 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 SLC2A3P11169 496 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 KRT5P13647 590 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 GOT1P17174 413 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 CCNA2P20248 432 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 HNRNPH3P31942 346 aaKnown RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 BSGP35613 385 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 AHRP35869 848 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 MDH1P40925 334 aaKnown RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 HTR2BP41595 481 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 ACOT2P49753 483 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 AP2S1P53680 142 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 ATP12AP54707 1039 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 AIF1P55008 147 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 AP1S2P56377 157 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 HNRNPKP61978 463 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 STX3Q13277 289 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 SCARB2Q14108 478 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 FZD2Q14332 565 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 HERC3Q15034 1050 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 TBCEQ15813 527 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 ADIPOQQ15848 244 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 HADHQ16836 314 aaKnown RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 SMU1Q2TAY7 513 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 TPRG1LQ5T0D9 272 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 LRIF1Q5T3J3 769 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 ALKBH5Q6P6C2 394 aaKnown RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 IYDQ6PHW0 289 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 LINGO4Q6UY18 593 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 RGS9BPQ6ZS82 235 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 STXBP4Q6ZWJ1 553 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 NUP54Q7Z3B4 507 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 TGIF2LYQ8IUE0 185 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 TCAIMQ8N3R3 496 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 TBC1D19Q8N5T2 526 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 EMC1Q8N766 993 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 DENND6BQ8NEG7 585 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 OR10V1Q8NGI7 309 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 OR8K5Q8NH50 307 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 KIAA1143Q96AT1 154 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF524Q96C55 264 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 RAB3IPQ96QF0 476 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 NTMT1Q9BV86 223 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 ACAT2Q9BWD1 397 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 PINK1Q9BXM7 581 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 PIGMQ9H3S5 423 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 CUEDC2Q9H467 287 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 ABCB8Q9NUT2 735 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 ASF1BQ9NVP2 202 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 COX16Q9P0S2 106 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 KLHL9Q9P2J3 617 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 LIMA1Q9UHB6 759 aaKnown RBP4.41□□□□□ -1.7
ATXN3-218ENST00000553309 DNAJC12Q9UKB3 198 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 SPATA2Q9UM82 520 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms