RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 GUSBP1Q15486 140 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MST1LQ2TV78 715 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 C19orf54Q5BKX5 351 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 KHDC1LQ5JSQ8 128 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 PCID2Q5JVF3 399 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 CTSL3PQ5NE16 218 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 C11orf71Q6IPW1 123 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 LIN54Q6MZP7 749 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 UGT3A1Q6NUS8 523 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF549Q6P9A3 640 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 TMEM64Q6YI46 380 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 C17orf107Q6ZR85 190 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MICALCLQ6ZW33 695 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 BBS12Q6ZW61 710 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 CPOQ8IVL8 374 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ST13P4Q8IZP2 240 aaPredicted RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 WDSUB1Q8N9V3 476 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 BBOF1Q8ND07 529 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 C17orf47Q8NEP4 570 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 OR2L5Q8NG80 312 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 OR52K1Q8NGK4 314 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 SLC5A11Q8WWX8 675 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 GTF3AQ92664 365 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 PPWD1Q96BP3 646 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 FAM136AQ96C01 138 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MS4A6EQ96DS6 147 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 BAG1Q99933 345 aaPredicted RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 VRK1Q99986 396 aaPredicted RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 FAM167BQ9BTA0 163 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 OSBPL11Q9BXB4 747 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 REXO4Q9GZR2 422 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 RAB1BQ9H0U4 201 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 OR10A5Q9H207 317 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MRPL46Q9H2W6 279 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 C10orf88Q9H8K7 445 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 FKRPQ9H9S5 495 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 PELI2Q9HAT8 420 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 SMURF2Q9HAU4 748 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ABHD10Q9NUJ1 306 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MOCS1Q9NZB8 636 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 DKKL1Q9UK85 242 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MCTS1Q9ULC4 181 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 CFL2Q9Y281 166 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 DTX4Q9Y2E6 619 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 DHRS7Q9Y394 339 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MED12LQ86YW9 2145 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 hCG_1818297A0A087WSY0 165 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 A0A1W2PRQ8 180 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 LRP5LA4QPB2 252 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 NOTOA8MTQ0 251 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 E7EVH7 732 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 SS18L1O75177 396 aaPredicted RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 SYNGR4O95473 234 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 AIFM1O95831 613 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TUBBP07437 444 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ENO2P09104 434 aaPredicted RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TACSTD2P09758 323 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ALOX15P16050 662 aaPredicted RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 CPN2P22792 545 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 PRTN3P24158 256 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 GIFP27352 417 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 RAD52P43351 418 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 RGS4P49798 205 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 CLNS1AP54105 237 aaKnown RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 AP1S2P56377 157 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 SESN2P58004 480 aaPredicted RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 LOXL3P58215 753 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 RPS16P62249 146 aaKnown RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 HERVK_113P63132 956 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ERVK-8P63133 956 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ID2Q02363 134 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 CHRNEQ04844 493 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 SLMAPQ14BN4 828 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 EBPQ15125 230 aaKnown RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ZSWIM7Q19AV6 140 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 AP5B1Q2VPB7 878 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 GLYR1Q49A26 553 aaPredicted RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TIMM23BQ5SRD1 257 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 PDSS1Q5T2R2 415 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 KANK2Q63ZY3 851 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 NEPROQ6NW34 567 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TMIGD1Q6UXZ0 262 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 BHLHA15Q7RTS1 189 aaPredicted RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 OR4N5Q8IXE1 308 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 RHOT2Q8IXI1 618 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ANKRD53Q8N9V6 530 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 NANPQ8TBE9 248 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ACTL9Q8TC94 416 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 LPGAT1Q92604 370 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TMEM186Q96B77 213 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 REXO5Q96IC2 774 aaKnown RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF778Q96MU6 729 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 GPA33Q99795 319 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 INPP5KQ9BT40 448 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TBCDQ9BTW9 1192 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 HEMGNQ9BXL5 484 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ERVK-6Q9BXR3 956 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 CAPS2Q9BXY5 557 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 POTEKPQ9BYX7 375 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 BPESC1Q9GZL8 116 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms