RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 HPGDP15428 266 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
PTCH1-226ENST00000553011 CA7P43166 264 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 ATP12AP54707 1039 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 GNGT1P63211 74 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 GPR68Q15743 365 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 CD226Q15762 336 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 SYPL1Q16563 259 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.84□□□□□ -0.35
PTCH1-226ENST00000553011 C4orf17Q53FE4 359 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 LRIF1Q5T3J3 769 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 C3P1Q6ZMU1 363 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 CD163Q86VB7 1156 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 FJX1Q86VR8 437 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 DOLPP1Q86YN1 238 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 FAM26EQ8N5C1 309 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 ANKFN1Q8N957 763 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 FADS6Q8N9I5 356 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 OR2M3Q8NG83 312 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 FAM57AQ8TBR7 257 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 ROPN1LQ96C74 230 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 ELAC2Q9BQ52 826 aaKnown RBP12.84□□□□□ -0.35
PTCH1-226ENST00000553011 OR2B2Q9GZK3 357 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 ZNF350Q9GZX5 532 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 SLC25A37Q9NYZ2 338 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 KCNE5Q9UJ90 142 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 MKLN1Q9UL63 735 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 SLC5A6Q9Y289 635 aa12.84□□□□□ -0.35
PTCH1-226ENST00000553011 FLNBO75369 2602 aaKnown RBP12.84□□□□□ -0.35
PTCH1-226ENST00000553011 UTP20O75691 2785 aaKnown RBP12.84□□□□□ -0.35
PTCH1-226ENST00000553011 IGLV3-32A0A0A0MS00 114 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 TRBV5-3A0A0A0MS03 114 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 C15orf38-AP3S2A0A0A6YYH1 394 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 CENPVL1A0A0U1RR11 272 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 CLIC1O00299 241 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 PRRG2O14669 202 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 GMFGO60234 142 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 TNFRSF21O75509 655 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 STX11O75558 287 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 RNF224P0DH78 156 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 DRD4P21917 467 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 DPP4P27487 766 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 SRD5A2P31213 254 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 CRATP43155 626 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 CASP6P55212 293 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 C17orf67Q0P5P2 114 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 KLF10Q13118 480 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 GPAT3Q53EU6 434 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 KLHL26Q53HC5 615 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 EMC4Q5J8M3 183 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 TYW3Q6IPR3 259 aaKnown RBP12.83□□□□□ -0.36
PTCH1-226ENST00000553011 FRRS1Q6ZNA5 592 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 SPATA21Q7Z572 469 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 RETREG3Q86VR2 466 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 ZNF614Q8N883 585 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 OR5M9Q8NGP3 310 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 OR14L1PQ8NHC6 308 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 RELTQ969Z4 430 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 NMUR2Q9GZQ4 415 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 HOXD1Q9GZZ0 328 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 PNPLA3Q9NST1 481 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 VAPAQ9P0L0 249 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 LEF1Q9UJU2 399 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-226ENST00000553011 DKKL1Q9UK85 242 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 NDUFAF1Q9Y375 327 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 WDR45Q9Y484 360 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 DOCK7Q96N67 2140 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 KIAA1549Q9HCM3 1950 aa12.83□□□□□ -0.36
PTCH1-226ENST00000553011 INTS1Q8N201 2190 aaKnown RBP12.82□□□□□ -0.36
PTCH1-226ENST00000553011 A0A1B0GUH1 482 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 A0A1W2PQD3 144 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 GMNCA6NCL1 334 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 OR14I1A6ND48 311 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 CCL21O00585 134 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 ANGPT2O15123 496 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 OIP5O43482 229 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 KIAA0513O60268 411 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 ZIC3O60481 467 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 H6PDO95479 791 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 CHRM4P08173 479 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 SNRPB2P08579 225 aaKnown RBP12.82□□□□□ -0.36
PTCH1-226ENST00000553011 ANXA11P50995 505 aaKnown RBP12.82□□□□□ -0.36
PTCH1-226ENST00000553011 DSTNP60981 165 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 TXNL4AP83876 142 aaKnown RBP12.82□□□□□ -0.36
PTCH1-226ENST00000553011 CHRNEQ04844 493 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 MAPK11Q15759 364 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 MAPK14Q16539 360 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 GXYLT1Q4G148 440 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 DCST1Q5T197 706 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 PDZK1Q5T2W1 519 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 DLEU7Q6UYE1 221 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 NCCRP1Q6ZVX7 275 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-226ENST00000553011 HMGN2P46Q86SG4 172 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 ZNF527Q8NB42 609 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 PHOSPHO1Q8TCT1 267 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 TSPEARQ8WU66 669 aa12.82□□□□□ -0.36
PTCH1-226ENST00000553011 SARAFQ96BY9 339 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms