RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 IGFBP7Q16270 282 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 EIF2S3LQ2VIR3 472 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 KLHL26Q53HC5 615 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 PDSS1Q5T2R2 415 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 INTS11Q5TA45 600 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 GKAP1Q5VSY0 366 aaPredicted RBP9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 FIGNL1Q6PIW4 674 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 RNF130Q86XS8 419 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 ZNF619Q8N2I2 560 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 SIMC1Q8NDZ2 872 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 OR4N2Q8NGD1 307 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 RFWD2Q8NHY2 731 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 FAM57AQ8TBR7 257 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 RASSF5Q8WWW0 418 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 PIK3R3Q92569 461 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 VPS33AQ96AX1 596 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 ROPN1LQ96C74 230 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 LRRC46Q96FV0 321 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 MARK4Q96L34 752 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 ZFP3Q96NJ6 502 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 GNRHR2Q96P88 292 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 NODALQ96S42 347 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 YIPF4Q9BSR8 244 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 OR2B2Q9GZK3 357 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 UBQLN3Q9H347 655 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 EFCAB1Q9HAE3 211 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 TIGARQ9NQ88 270 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 SERHLQ9NQF3 203 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 NDE1Q9NXR1 346 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 COQ3Q9NZJ6 369 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 NTNG1Q9Y2I2 539 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 PCDHB14Q9Y5E9 798 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 GPC6Q9Y625 555 aaPredicted RBP9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 ZGRF1Q86YA3 2104 aa9.37□□□□□ -0.91
TRAFD1-208ENST00000552890 NINQ8N4C6 2090 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 TRGV8A0A0C4DH27 118 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 GXYLT2A0PJZ3 443 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 C7orf72A4D263 438 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 LRRC3CA6NJW4 275 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 HMGN4O00479 90 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 ZNF264O43296 627 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 KIAA0513O60268 411 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 SNX3O60493 162 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 DNAJA2O60884 412 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 IFNA14P01570 189 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 BMP2P12643 396 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 ETS2P15036 469 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 IL7RP16871 459 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 PGCP20142 388 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 MST1P26927 711 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 PRDX6P30041 224 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 HTR3AP46098 478 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 P2RX1P51575 399 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 RPS3AP61247 264 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 PMP22Q01453 160 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 CBFBQ13951 182 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 NFYCQ13952 458 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 RGNQ15493 299 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 TRMT5Q32P41 509 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 GRAMD1BQ3KR37 738 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 EIPR1Q53HC9 387 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 PRR30Q53SZ7 412 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 TNFAIP8L2Q6P589 184 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 XKRXQ6PP77 449 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 DHDDSQ86SQ9 333 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 FUNDC1Q8IVP5 155 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 MEIOBQ8N635 442 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 FADS6Q8N9I5 356 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 C11orf65Q8NCR3 313 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 TNIP2Q8NFZ5 429 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 OR8J3Q8NGG0 315 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 OR9I1Q8NGQ6 314 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 B4GALNT2Q8NHY0 566 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 BBS10Q8TAM1 723 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 PHOSPHO1Q8TCT1 267 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 DUSP19Q8WTR2 217 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 ABTB1Q969K4 478 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 HOPXQ9BPY8 73 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 THUMPD3Q9BV44 507 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 TRIM4Q9C037 500 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 PAIP1Q9H074 479 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 DEFB127Q9H1M4 99 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 ZNF385DQ9H6B1 395 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 TMEM38AQ9H6F2 299 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 PROK2Q9HC23 129 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 SLC24A3Q9HC58 644 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 A4GALTQ9NPC4 353 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 EXOSC3Q9NQT5 275 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 SAR1AQ9NR31 198 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 SERINC1Q9NRX5 453 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 SLC13A4Q9UKG4 626 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 OSGIN2Q9Y236 505 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 SPIN1Q9Y657 262 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 AP4B1Q9Y6B7 739 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 SHANK1Q9Y566 2161 aa9.36□□□□□ -0.91
TRAFD1-208ENST00000552890 A0A1B0GTH9 108 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 SERINC4A6NH21 518 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 G3V3Y1 287 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms