RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ZNF474Q6S9Z5 364 aaPredicted RBP10.7□□□□□ -0.7
CKAP4-202ENST00000552828 GRAMD2AQ8IUY3 354 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 CCDC116Q8IYX3 515 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 EGLN2Q96KS0 407 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 MARK4Q96L34 752 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 PPP1R36Q96LQ0 422 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 VSTM2LQ96N03 204 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 SFXN2Q96NB2 322 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 TSSK3Q96PN8 268 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 BBS4Q96RK4 519 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 ADOQ96SZ5 270 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 NUF2Q9BZD4 464 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 TAS2R7Q9NYW3 318 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 GIMAP2Q9UG22 337 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 BAIAP2L1Q9UHR4 511 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 EXPH5Q8NEV8 1989 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 ATRQ13535 2644 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 TRPC5OSA6NMA1 111 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 HDAC3O15379 428 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 REM1O75628 298 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 CGAP01215 116 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 KITP10721 976 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 DDX5P17844 614 aaKnown RBP10.69□□□□□ -0.7
CKAP4-202ENST00000552828 FPR1P21462 350 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 DPP4P27487 766 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 UGT2B10P36537 528 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 CPOXP36551 454 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 CD79BP40259 229 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 KIR2DL2P43627 348 aaPredicted RBP10.69□□□□□ -0.7
CKAP4-202ENST00000552828 PNLIPRP2P54317 469 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 CLDN15P56746 228 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 EMX2Q04743 252 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 ACKR1Q16570 336 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 IL23RQ5VWK5 629 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 FAM180BQ6P0A1 224 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 R3HCC1LQ7Z5L2 792 aaKnown RBP10.69□□□□□ -0.7
CKAP4-202ENST00000552828 PRIMA1Q86XR5 153 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 P3H2Q8IVL5 708 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 CIARTQ8N365 385 aaPredicted RBP10.69□□□□□ -0.7
CKAP4-202ENST00000552828 CLHC1Q8NHS4 586 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 GFM2Q969S9 779 aaKnown RBP10.69□□□□□ -0.7
CKAP4-202ENST00000552828 C1orf50Q9BV19 199 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 REEP4Q9H6H4 257 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 AKTIPQ9H8T0 292 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 MEAF6Q9HAF1 191 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 ELOVL5Q9NYP7 299 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 ZNF226Q9NYT6 803 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 C6orf203Q9P0P8 240 aaPredicted RBP10.69□□□□□ -0.7
CKAP4-202ENST00000552828 MARCOQ9UEW3 520 aaPredicted RBP10.69□□□□□ -0.7
CKAP4-202ENST00000552828 ADAM21Q9UKJ8 722 aa10.69□□□□□ -0.7
CKAP4-202ENST00000552828 SLC22A20A6NK97 555 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 MYO1GB0I1T2 1018 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 EMC8O43402 210 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 AKAP10O43572 662 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 PLOD3O60568 738 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 PEPDP12955 493 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 LOXP28300 417 aaPredicted RBP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 NTSP30990 170 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 CCKARP32238 428 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 HPCAL1P37235 193 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 RPL3P39023 403 aaKnown RBP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 DSCR4P56555 118 aaPredicted RBP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 CORO7P57737 925 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 OR5M10Q6IEU7 315 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 VWA1Q6PCB0 445 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 NPSR1Q6W5P4 371 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 C20orf204Q6ZNR8 217 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 LARP4Q71RC2 724 aaKnown RBP eCLIP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 BTLAQ7Z6A9 289 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 WDR75Q8IWA0 830 aaKnown RBP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 LRRC34Q8IZ02 419 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 FADS6Q8N9I5 356 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 PIWIL2Q8TC59 973 aaKnown RBP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 NUDT8Q8WV74 236 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 PPCDCQ96CD2 204 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 MTERF3Q96E29 417 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 ZNF764Q96H86 408 aaPredicted RBP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 C7orf26Q96N11 449 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 SLC39A3Q9BRY0 314 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 BDH2Q9BUT1 245 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 KLHL28Q9NXS3 571 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 NOP53Q9NZM5 478 aaKnown RBP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 SH3BP4Q9P0V3 963 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 DKKL1Q9UK85 242 aa10.68□□□□□ -0.7
CKAP4-202ENST00000552828 FBN1P35555 2871 aaKnown RBP10.68□□□□□ -0.7
CKAP4-202ENST00000552828 HIVEP2P31629 2446 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 STAB1Q9NY15 2570 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 C16orf97H3BN30 126 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 H7C1Q1 480 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 LINC01387J3KSC0 135 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 TBX19O60806 448 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 TNFRSF21O75509 655 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 SMNDC1O75940 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
CKAP4-202ENST00000552828 CD8BP10966 210 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 G6PDP11413 515 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 PAX1P15863 534 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 LBPP18428 481 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 PRPS1L1P21108 318 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 NCBP2P52298 156 aaKnown RBP eCLIP10.67□□□□□ -0.7
CKAP4-202ENST00000552828 EEFSECP57772 596 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms