RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 C17orf51A8MQB3 221 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 FAM47E-STBD1D6RA91 191 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 NPIPA7E9PJI5 369 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 ACTL6AO96019 429 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 NPIPA8P0DM63 369 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 CRYZQ08257 329 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 AAGABQ6PD74 315 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 ENPP6Q6UWR7 440 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 MRGPRGQ86SM5 289 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 RNF130Q86XS8 419 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 PM20D2Q8IYS1 436 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 ZNF808Q8N4W9 903 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 FADS6Q8N9I5 356 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 CHDHQ8NE62 594 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 RAB8BQ92930 207 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 ABTB1Q969K4 478 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 PSMG3-AS1Q96PY0 264 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 FGFR1OP2Q9NVK5 253 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 CCDC167Q9P0B6 97 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 CAMK2AQ9UQM7 478 aa16.8■□□□□ 0.28
PRPF40B-216ENST00000552301 A0A1W2PQD3 144 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 GMFGO60234 142 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 STX11O75558 287 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 HOXD4P09016 255 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 BMP7P18075 431 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 HK1P19367 917 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 PTGER4P35408 488 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 RCAN2Q14206 197 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 SF3B4Q15427 424 aaKnown RBP eCLIP16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 ZNF630Q2M218 657 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 ARHGAP11BQ3KRB8 267 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 AGKQ53H12 422 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 NHSL2Q5HYW2 709 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 EMC4Q5J8M3 183 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 C1orf185Q5T7R7 199 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 RAET1LQ5VY80 246 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 APOOLQ6UXV4 268 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 B3GNT6Q6ZMB0 384 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 PNPT1Q8TCS8 783 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 PHOSPHO1Q8TCT1 267 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 SPDL1Q96EA4 605 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 DMRTA2Q96SC8 542 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 SDF2Q99470 211 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 UGT2B28Q9BY64 529 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 RTN4RQ9BZR6 473 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 TMEM45AQ9NWC5 275 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 COQ3Q9NZJ6 369 aa16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 RPH3AQ9Y2J0 694 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 MRPS18CQ9Y3D5 142 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-216ENST00000552301 IGLV3-32A0A0A0MS00 114 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 ADAM10O14672 748 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 MSX1P28360 303 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 MDH1P40925 334 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 ZFP36L2P47974 494 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 ATP12AP54707 1039 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 ADORA2A-AS1P86434 159 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 GPR68Q15743 365 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 GPAT3Q53EU6 434 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 VASNQ6EMK4 673 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 XKRXQ6PP77 449 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 NCCRP1Q6ZVX7 275 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 MAMDC2Q7Z304 686 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 ULK2Q8IYT8 1036 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 ITLN2Q8WWU7 325 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 RND1Q92730 232 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 C1GALT1C1Q96EU7 318 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 SH3YL1Q96HL8 342 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 TIMP4Q99727 224 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 TMEM120AQ9BXJ8 343 aa16.78■□□□□ 0.28
PRPF40B-216ENST00000552301 MED12Q93074 2177 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 USP9YO00507 2555 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 CYSRT1A8MQ03 144 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 GTPBP1O00178 669 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 HCRTR2O43614 444 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 ZCCHC18P0CG32 403 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 MAGEA8P43361 318 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 ZNF41P51814 821 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 HEPHL1Q6MZM0 1159 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 SLC2A7Q6PXP3 512 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 BLOC1S3Q6QNY0 202 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 MTERF4Q7Z6M4 381 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 ZFP90Q8TF47 636 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 ROPN1LQ96C74 230 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 SDCCAG3Q96C92 435 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 NMUR2Q9GZQ4 415 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 PRDM14Q9GZV8 571 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 ZNF350Q9GZX5 532 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 CCDC134Q9H6E4 229 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 POLE3Q9NRF9 147 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 PLEKHB1Q9UF11 243 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 LIPT1Q9Y234 373 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 WDR45Q9Y484 360 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 DTNAQ9Y4J8 743 aa16.77■□□□□ 0.28
PRPF40B-216ENST00000552301 AHRRA9YTQ3 701 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 H0Y3Z8 333 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 HMGN4O00479 90 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 AGAP20933 346 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 CHMP24386 653 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 ARFIP2P53365 341 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 PMPCAQ10713 525 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms