RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 FABP6P51161 128 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 PRR5P85299 388 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 PSG6Q00889 435 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 GGTLC2Q14390 218 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 STK11Q15831 433 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 CR1LQ2VPA4 569 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 SLC22A25Q6T423 547 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 Q6ZT83 130 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 GOLGA7Q7Z5G4 137 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 CCDC91Q7Z6B0 441 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-220ENST00000551716 ZNF540Q8NDQ6 660 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 RNF128Q8TEB7 428 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 KAT2AQ92830 837 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 C1orf159Q96HA4 380 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 PIMREGQ9BSJ6 248 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 ANKRA2Q9H9E1 313 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 SENP1Q9P0U3 644 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 VDAC3Q9Y277 283 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 VWC2LB2RUY7 222 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 SHISA8B8ZZ34 492 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 ESRRBO95718 433 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 IL33O95760 270 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 ANGPTL1O95841 491 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 DHRS4L1P0CG22 281 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 NR4A2P43354 598 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 COMPP49747 757 aaPredicted RBP13.53□□□□□ -0.24
CACNB3-220ENST00000551716 CCNG1P51959 295 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 CSTF3Q12996 717 aaKnown RBP13.53□□□□□ -0.24
CACNB3-220ENST00000551716 FAM83EQ2M2I3 478 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 FAM174BQ3ZCQ3 159 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 SH2D4BQ5SQS7 431 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 FAM180BQ6P0A1 224 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 KLHL17Q6TDP4 642 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 CYS1Q717R9 158 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 NUFIP2Q7Z417 695 aaKnown RBP13.53□□□□□ -0.24
CACNB3-220ENST00000551716 TUSC5Q8IXB3 177 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 SLC43A2Q8N370 569 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 OR9A2Q8NGT5 310 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 ACTRT2Q8TDY3 377 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 CPNE4Q96A23 557 aaPredicted RBP13.53□□□□□ -0.24
CACNB3-220ENST00000551716 PRR14Q9BWN1 585 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 SHCBP1LQ9BZQ2 653 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 RTN4RQ9BZR6 473 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 ELOVL6Q9H5J4 265 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 NOL11Q9H8H0 719 aaKnown RBP13.53□□□□□ -0.24
CACNB3-220ENST00000551716 C3orf14Q9HBI5 128 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 Q9N2J8 555 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 SLC12A4Q9UP95 1085 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 MALRD1Q5VYJ5 2156 aa13.53□□□□□ -0.24
CACNB3-220ENST00000551716 A0A0J9YW62 118 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 E7ESA3 106 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 NME6O75414 186 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-220ENST00000551716 PIAS1O75925 651 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 SLITRK5O94991 958 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 GGT1P19440 569 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 ZNF155Q12901 538 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-220ENST00000551716 DLG1Q12959 904 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 ACAP2Q15057 778 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 ZNHIT3Q15649 155 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-220ENST00000551716 GRTP1Q5TC63 336 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 TRABD2AQ86V40 505 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 CDYL2Q8N8U2 506 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 ABHD3Q8WU67 409 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 HTRA1Q92743 480 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 KLHL15Q96M94 604 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 BRF2Q9HAW0 419 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 MYOZ1Q9NP98 299 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-220ENST00000551716 FLRT3Q9NZU0 649 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 NFU1Q9UMS0 254 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 FKBP7Q9Y680 259 aa13.52□□□□□ -0.25
CACNB3-220ENST00000551716 TENM1Q9UKZ4 2725 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 A0A087WV62 115 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 GJE1A6NN92 205 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 CXorf49A8MYA2 514 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-220ENST00000551716 ZNF814B7Z6K7 855 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 PGM3O95394 542 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 OPN1LWP04000 364 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 PSMA4P25789 261 aaKnown RBP13.51□□□□□ -0.25
CACNB3-220ENST00000551716 EIF1P41567 113 aaKnown RBP13.51□□□□□ -0.25
CACNB3-220ENST00000551716 ZNF41P51814 821 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-220ENST00000551716 GALNT1Q10472 559 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-220ENST00000551716 FASTKD3Q14CZ7 662 aaKnown RBP13.51□□□□□ -0.25
CACNB3-220ENST00000551716 ZNF239Q16600 458 aaKnown RBP13.51□□□□□ -0.25
CACNB3-220ENST00000551716 ZBED8Q8IZ13 594 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 FAM9CQ8IZT9 166 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 LILRA2Q8N149 483 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 PPM1NQ8N819 430 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 CEP112Q8N8E3 955 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 OR2W6PQ8NHA6 318 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 PYROXD1Q8WU10 500 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 NXNL1Q96CM4 212 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 CDK15Q96Q40 435 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 BHLHE41Q9C0J9 482 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-220ENST00000551716 METRNQ9UJH8 293 aa13.51□□□□□ -0.25
CACNB3-220ENST00000551716 LOC390937A0A1W2PQ73 354 aa13.5□□□□□ -0.25
CACNB3-220ENST00000551716 ESYT3A0FGR9 886 aa13.5□□□□□ -0.25
CACNB3-220ENST00000551716 TTC36A6NLP5 189 aa13.5□□□□□ -0.25
CACNB3-220ENST00000551716 OR7A17O14581 309 aa13.5□□□□□ -0.25
CACNB3-220ENST00000551716 GMFGO60234 142 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms