RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 MMP15P51511 669 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 ZNF157P51786 506 aaPredicted RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 DEFA5Q01523 94 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 CNTN1Q12860 1018 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 CST9Q5W186 159 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 HIST2H2AA3Q6FI13 130 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 IKBIPQ70UQ0 350 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 MRGPREQ86SM8 312 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 C2orf73Q8N5S3 287 aaPredicted RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 C17orf47Q8NEP4 570 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 GANCQ8TET4 914 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 ZNF480Q8WV37 535 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 EXOSC8Q96B26 276 aaKnown RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 PELOQ9BRX2 385 aaKnown RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 ALG8Q9BVK2 526 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 SPATA5L1Q9BVQ7 753 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 LRRN3Q9H3W5 708 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 IFT22Q9H7X7 185 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 HINT3Q9NQE9 182 aaKnown RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 MARK1Q9P0L2 795 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 NTMQ9P121 344 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 ZNF69Q9UC07 566 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 AIPO00170 330 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 PGRMC2O15173 223 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 ADAM12O43184 909 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 SUSD5O60279 629 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 SOCS5O75159 536 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 LDOC1O95751 146 aaPredicted RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 CATP04040 527 aaKnown RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 RPL17P18621 184 aaKnown RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 RNF144AP50876 292 aaPredicted RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 CCR8P51685 355 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 CTSCP53634 463 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 RAG2P55895 527 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 RTP2Q5QGT7 225 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 PIP5KL1Q5T9C9 394 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 FAAP20Q6NZ36 180 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 PRSS55Q6UWB4 352 aaPredicted RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 RTN4RL1Q86UN2 441 aaPredicted RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 PAQR7Q86WK9 346 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 LRRC56Q8IYG6 542 aaPredicted RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 DCAF4L2Q8NA75 395 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 BBS10Q8TAM1 723 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 TMEM159Q96B96 161 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 EXOGQ9Y2C4 368 aaKnown RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 CPSF4LA6NMK7 179 aaKnown RBP11.43□□□□□ -0.58
ERBB3-219ENST00000551242 OR5K4A6NMS3 321 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 ADRB1P08588 477 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 ATF1P18846 271 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SPINT3P49223 89 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 FGL2Q14314 439 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 TAF1CQ15572 869 aaPredicted RBP11.43□□□□□ -0.58
ERBB3-219ENST00000551242 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SLITRK4Q8IW52 837 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 OR5W2Q8NH69 310 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 OR1S1Q8NH92 325 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 VOPP1Q96AW1 172 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 MRPS24Q96EL2 167 aaKnown RBP11.43□□□□□ -0.58
ERBB3-219ENST00000551242 PRRC1Q96M27 445 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 C12orf57Q99622 126 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 ACTR6Q9GZN1 396 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 EVA1AQ9H8M9 152 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SIRT3Q9NTG7 399 aaPredicted RBP11.43□□□□□ -0.58
ERBB3-219ENST00000551242 MED9Q9NWA0 146 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 H2AFY2Q9P0M6 372 aaPredicted RBP11.43□□□□□ -0.58
ERBB3-219ENST00000551242 B4GALT6Q9UBX8 382 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 NTNG1Q9Y2I2 539 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 OR6C75A6NL08 312 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SELENOFO60613 162 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 C4BPBP20851 252 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 HTR1FP30939 366 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 CTSOP43234 321 aaPredicted RBP11.43□□□□□ -0.58
ERBB3-219ENST00000551242 TAS2R41P59536 307 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 GNA13Q14344 377 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SLC22A10Q63ZE4 541 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 PLBD1Q6P4A8 553 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 OR10H4Q8NGA5 316 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 ABHD4Q8TB40 342 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SCARB1Q8WTV0 552 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SLC5A11Q8WWX8 675 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SMPDL3AQ92484 453 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 SLC38A3Q99624 504 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.43□□□□□ -0.583e-6■■□□□ 14.4
ERBB3-219ENST00000551242 ARL6Q9H0F7 186 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 ICKQ9UPZ9 632 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 CA5BQ9Y2D0 317 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
ERBB3-219ENST00000551242 FOXE1O00358 373 aaPredicted RBP11.42□□□□□ -0.58
ERBB3-219ENST00000551242 REM1O75628 298 aa11.42□□□□□ -0.58
ERBB3-219ENST00000551242 IGSF6O95976 241 aa11.42□□□□□ -0.58
ERBB3-219ENST00000551242 C1GALT1C1LP0DN25 315 aa11.42□□□□□ -0.58
ERBB3-219ENST00000551242 ANXA7P20073 488 aaKnown RBP11.42□□□□□ -0.58
ERBB3-219ENST00000551242 PRKAG1P54619 331 aa11.42□□□□□ -0.58
ERBB3-219ENST00000551242 EPHA4P54764 986 aa11.42□□□□□ -0.58
ERBB3-219ENST00000551242 PSMA6P60900 246 aaKnown RBP11.42□□□□□ -0.58
ERBB3-219ENST00000551242 SMAD3P84022 425 aaKnown RBP11.42□□□□□ -0.58
ERBB3-219ENST00000551242 TSPAN31Q12999 210 aa11.42□□□□□ -0.58
ERBB3-219ENST00000551242 TAF12Q16514 161 aa11.42□□□□□ -0.58
ERBB3-219ENST00000551242 CDC73Q6P1J9 531 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms